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Natural Prodcast Episode 15: Katherine Duncan
… the idea of taking all the different natural products data that there is and putting things, coalescing them, so … that I’ve appreciated since starting my own group is these tools, in terms of looking at the chemistry produced by … And as a result, there’s been a lot of work on open pond systems and infrastructure and growing microalgae. And to …
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Natural Prodcast Episode 12: Nadine Ziemert
… about natural products and the science and scientists of secondary metabolism. Welcome back. This will be episode 12 … much I actually can learn just by really digging into the data and understanding what’s going on there. And now, … more into the meta genome mining. We started to build the tools for natural product researchers that easily can …
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FICUS-NERSC/KBASE
… of Science through high performance computing (HPC) and data analysis.  The DOE Systems Biology Knowledgebase ( KBase ) integrates systems biology data and tools to help predict biological function.   To jointly …
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Microbial Program
The program provides high-quality, large-scale genomic data to advance microbial research that drives sustainable … The program aims to generate high-quality genomic datasets, particularly for uncultivated microorganisms, by … available genomes from three domains of life. It provides tools for analyzing the functional capability of microbial …
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Synthesis
… group and focused on new technologies and optimizing tools — including strain engineering — to make them more … Synthetic Biology Informatics Group : a team that develops data science tools for workflow management and novel … users to validate hypotheses generated from mining genomic data by designing and assembling physical DNA constructs …
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Natural Prodcast
… about natural products and the science and scientists of secondary metabolism. Natural products, secondary metabolites, and specialized metabolites all refer …
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How To Use Our Systems
Looking for information on our software, including BBTools ? Click to find that on our archive site.  …
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Natural Prodcast Episode 18: A CSP Primer
… did those sequences go? Like, what are the other scientific tools we offer people? TANJA WOYKE: Yeah. Also a really good … algal genomes, a lot of effort goes into generating these data sets. There’s a lot of manual work in terms of the … focus within BER anymore. We really focus on terrestrial ecosystems, but we work in coastal environments, brackish …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… for a long time about the evolution and natural products systems. This conversation came about because he challenged … him about more recent work like ActDES, which is a curated database of actinobacteria for evolutionary studies, and … I have the feeling that once we have the synthetic biology tools, we finally are in a position to exploit secondary …
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Natural Prodcast Episode 11: Marnix Medema
… about natural products and the science and scientists of secondary metabolism. Hey there, and welcome back to Natural … center and a lot of the really important recent events in data analysis and secondary metabolism over the last decade or so. He’s involved with a lot of the common tools that genome miners use, including antiSMASH, MIBiG, …
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Natural Prodcast Episode 9: Roger Linington
… or NPAtlas, a freely accessible natural products structure database, which is going to be just invaluable to the … has gone on, the more we’ve become interested in sort of systems level approaches. So rather than asking one question … we’re now very much – we’re interested in how we can build tools which will let us see the whole landscape of natural …
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DNA Synthesis Program
… the design and synthesis of complex genetic pathways and biosystems. It The program fosters collaboration with U.S. and … The DNA Synthesis Program aims to generate large datasets to explore sequence-function relationships, … innovative screening technologies and computational tools that enhance biofuel production and biosystem design. …
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