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… The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene … The DNA Synthesis Program aims to generate large datasets to explore sequence-function relationships, … innovative screening technologies and computational tools that enhance biofuel production and biosystem design. …

… examples of approved proposals, please visit the Proposals FAQ .  … then be used to submit proposals, sample and project metadata, and to access JGI tools and systems. … The Project Overview report includes project-level metadata such as the project name, current status, NCBI & JGI …

… Program combines large-scale, time-series metagenomic data with detailed characterization of model systems to … evolution. The Program focuses on developing computational tools and visualization resources that support user analysis of biogeochemically-relevant pathways, …

… bolster agricultural resilience. The program’s discoveries support a plant based bioeconomy where plants are a major … understanding of plant diversity and integrating various data types to explore the molecular mechanisms behind phenotypic evolution. It also utilizes advanced tools, including deep learning algorithms for gene …

… Laboratory. The JGI consists of 225 researchers and support staff in the Integrative Genomics Building in … Systems Biology Knowledgebase and the National Microbiome Data Collective.    … other relevant organisms. We provide access to large-scale datasets and analysis tools for genomes, metagenomes, and …

… characterize bioactive secondary metabolite compounds. To support users, our efforts include developing computational tools for predicting biosynthetic gene clusters (BGCs), … cell- and cell free-based expression platforms, tools and data for deciphering regulatory networks, and refining …

… fungal and algal pangenomes, and integrate multi-omics tools to enhance functional studies. These efforts seek to … gene markers, and producing environmental genomes to support both basic research and applied science. By … sampling of fungi, laboratory analysis and genomics data exploration. …

… The program provides high-quality, large-scale genomic data to advance microbial research that drives sustainable … The program aims to generate high-quality genomic datasets, particularly for uncultivated microorganisms, by … microbial functions and interactions, the Microbial Program supports innovations in sustainable agriculture, carbon …

… cells of the uncultivated SAR324. The constellation of data gave the team unprecedented resolution to study the … were also processed using the JGI-developed software suite, BBTools , and relying on the JGI Integrated Microbial Genomes … This research was supported by grants from the Simons Foundation (#329108 and …

… of Science through high performance computing (HPC) and data analysis.  The DOE Systems Biology Knowledgebase ( KBase ) integrates systems biology data and tools to help predict biological function.   To jointly support these missions, and to expand upon highly successful …

… Group develop, deploy, and maintain software that support the JGI’s Synthetic Biology Program .  … CRISPR gRNA design tool BOOST , which provides a suite of tools to automate sequence design for assembly by Gibson, … and Golden Gate methods SynTrack and associated tools, which track samples through the JGI’s Synthetic …

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