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… The CSP and FICUS calls are open to both domestic and … Agreement must be signed before work can begin, and all CSP proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to the CSP New Investigator call, investigators may have existing …

… and pathways. The JGI Metabolomics Platform delivers rich metabolite profiles from diverse biological and … At JGI, in-depth molecular profiles are generated for metabolites extracted from a variety of experimental … types of environments (e.g. soil, lake).  A wide range of metabolites are identified using LC-MS/MS methods optimized …

… and comparative analysis of thousands of archaeal and bacterial type strains ( GEBA-type strains project ), the … bacteriophages. Cell . 185(21):4023-4037 Nayfach S, et al. (2021) Metagenomic compendium of 189,680 DNA viruses from the … genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea.  Nature Biotechnology  35(8):725-731 …

… ZIEMERT: Big picture, I want to understand how secondary metabolites evolve– who makes them, how do they spread, why do they spread in a certain way from one bacteria to another, how do they change then, and why are … We smell them, right? We drink them. I mean, secondary metabolites, natural products, caffeine, all that stuff …

… of the Joint Genome Institute and head of the Secondary Metabolites Science Program at JGI, and also my boss, Nigel … of JGI, but he’s also my boss and the head of the Secondary Metabolites Science Program , is that what we officially … we partnered with a company in Japan, Meiji Seika Pharma, transferred the technology that they developed over to Dow …

… Roux, S., Paul, B.G., Bagby, S.C. et al. (2021) Ecology and molecular targets of hypermutation in the … https://doi.org/10.1016/j.tim.2022.05.003 Berg, M. et al. (2021) Host population diversity as a driver of viral infection cycle in wild populations of green sulfur bacteria with long standing virus-host interactions. ISME J. …

… Scripps. So we’re looking at biosynthesis of marine fungal metabolites. We’re also looking– now we’re started a newer … So we’re now trying to see the implications of those effects and how that compares to Owens Lake in California … has been doing work in secondary metabolism. The very first CSP I ever worked on back in Brad’s lab, we talked about it …

… can you tell me the story of how you got into secondary metabolites? Kate Duncan: So I always liked science in … their ability to evolve, to go with horizontal gene transfer and run with it and produce different chemistry. … conditions, oxygen conditions. Don’t get me started about temperature and all the rest, right. So you’ve only got, …

… FY22 and later through the Community Science Program (CSP), Facilities Integrating Collaborations for User Science … for which JGI has not yet received samples as of Sep 30, 2021 are subject to a 2-year embargo to maintain the … Data from projects that received samples before Sep 30, 2021 and are ongoing are subject to the 2-year …

… genomics with metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It also enables … Program is focused on understanding the critical roles of metabolites in living systems, particularly as they relate … ecosystems. Identifying and analyzing primary and secondary metabolites helps uncover their roles in processes such as …

… the user and no granting of funds.    Proposal Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics JGI-TMF Critical Minerals and …

… in Nature and Medicine.” It’s obviously focused more on the bacterial side of the field, and it’s a little hard to find … So you know it’s not doing harm and there aren’t side effects. ALISON: Yeah, I guess you’d use something like a … the genes that code for the proteins that produce secondary metabolites. Do you recognize this? DNA 🡺 RNA 🡺 Protein …