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Viral Genomics Group
… parameters driving virus:host dynamics in environmental microbial communities. This involves both experimental and … invaluable information on virus diversity and activity in microbial communities, however they can only provide a … https://doi.org/10.1038/s41396-020-00870-1 Roux, S. et al. (2019) Cryptic inoviruses revealed as pervasive in bacteria …
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New Lineages of Life Group
… Cataloging Earth's microbial lineages through advanced genomic techniques and … reveal new lineages and functional capabilities in the microbial world. … A.I., Mars Brisbin, M., Hu, S.K. et al. (2024) “ Missing microbial eukaryotes and misleading meta-omic conclusions …
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Plant Microbial Interactions Group
… including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all … how plants self-organize, influence, and are influenced by microbial partners. We use a variety of genomics-powered … 10.1073/pnas.1907500116 10.1016/j.celrep.2019.04.054 10.1371/journal.pbio.2002860 …
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Frequently Asked Questions: Proposal Submission
… The CSP and FICUS calls are open to both domestic and … Agreement must be signed before work can begin, and all CSP proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to the CSP New Investigator call, investigators may have existing …
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User Programs
… the user and no granting of funds.    Proposal Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics JGI-TMF Critical Minerals and …
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Who We Are
… from plants, fungi, algae, non-medical microbes, microbial communities, and other relevant organisms. We … went on to advance basic science by sequencing scores of microbial species as well as several model organisms and … program in the DOE’s Office of Science. In December 2019, the JGI relocated to the Integrative Genomics Building …
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Metagenome Program
… genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses several experimental approaches to assess microbial activity across ecosystems.  By studying microbial communities and their interactions, the Program …
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The Expanding Universe of Methane Metabolisms in Archaea
… genomes provide new insights into an ancient metabolism. Methane is a greenhouse gas 20 times more potent than carbon … metabolisms is “vastly underestimated.” In the March 4, 2019, issue of Nature Microbiology , they mined the Integrated Microbial Genomes & Microbiomes (IMG/M) database maintained …
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JGI Earth Month: Wetlands Work in #TenHundredWords
… Tringe , JGI’s User Programs deputy and head of the Microbial Systems group through the  DOE Office of Science … . Her research project, “Microbial Community Structure and Methane Production in California’s Canal System,” focuses on … it yourself  here .) She translated her abstract from a 2019 conference. Both versions appear side-by-side below: …
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10 From JGI on the 2019 Highly Cited Researchers List
… the IP & Science arm of Thomson Reuters, has released their 2019 list of Highly Cited Researchers , which includes 10 affiliated with the JGI . The 2019 list focused on Highly Cited Papers, defined in the … Animal Science and Molecular Biology & Genetics categories Microbial Systems research group lead and User Programs …
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Metabolic interactions underpinning high methane fluxes across terrestrial freshwater wetlands
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Special Initiatives & Programs
… and should generally conform to the guidelines for our  CSP Large Scale call .  Process Proposals may be submitted … breakthroughs in basic science, and is exploring microbial-based synthesis of fuels beyond ethanol. …
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