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… It was unpublished at that point. But people would push out gene clusters maybe once a month at most. Maybe twice a … colors. I mean, where else in nature– and they’re not fungal. Where else nature can you go see colonies of … if you want– if you really want to, you can do heterologous expression. You can do homologous expression techniques and …

… metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It also enables exploration of energy … JGI scientists are able to link metabolic activity with gene expression, providing deeper insights into functional … a web-based service returns a list of scored reaction and gene matches associated with metabolites and a list of …

… to regulate Earth's carbon balance, to exploring the genetic basis of how plants have naturally adapted to varied … climate and soil conditions around the globe to identify genes to improve our domesticated species.  The program supports the development of next-generation biofuels by studying perennial grasses and …

… diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial … single-cell and spatial transcriptomics barcode-based genetics (RB-TnSeq), and computational genomics to better … strains, whereby they can modulate host metabolism, gene expression and phenotype. We have recently identified …

… and BiG-SLiCE, and now the BiG-FAM database of biosynthetic gene cluster families. And he tells us about forthcoming … was a proposal on synthetic biology of engineering gene expression in bacteria – however, the professor was actually … are protecting the plants against pathogens. So usually fungal or oomycete pathogens. In this case they worked on a …

… my undergraduate in microbiology and then PhD in microbial genetics in the UK. And came across to the US for a couple … NIGEL MOUNCEY: Yeah, so we put out a strategic plan in 2018. And in building that plan, we thought about secondary … explore the regulation of biosynthetic gene cluster expression in organisms. And that’s led by Hiroshi Otani …

… percentile*) DNA Synthesis Constructs <5kb in size Single gene or multiple small genes assembled to less than 5kb in … to determine coverage of variants depends on project Fungal Minimal Draft Lower coverage short-read whole genome … alignment files 384/454 Fungal Transcriptome RNA for expression profiling and genome annotation (single …

… of biological processes that enable cost-effective energy generation and innovative materials production. Through … provides genomic insights to improve energy crops, enhance biomass conversion efficiency, and discover microbial pathways for … production systems.  Invasive plant species; and first-generation biofuel targets (i.e. corn, sugarcane, …

… that consists of coordinated hands-on experiments across fungal biology teaching labs. The purpose of the program is … and data analyses compile original data for improving fungal genomic resources empower students through isolation … species.  Students collect fungi, sterilize tissue, isolate genes and more. The metadata then goes into iNaturalist. …

… bit more into fungi and learning the differences of all the genetic differences and then expanded on on that knowledge … not enough time and money. I mean, we have a huge marine fungal project in collaboration with Bill Fenical at … has been doing work in secondary metabolism. The very first CSP I ever worked on back in Brad’s lab, we talked about it …

… This process enables our users to explore the genetic makeup of microbial communities, shedding light on … incorporation of isotopes from labeled nutrients into biomass. When paired with metagenomics, qSIP can decipher … whole genome sequences, providing a guide for measuring genetic distinctiveness of isolates.  …

… genomics existed. This is before we’re even thinking of genes and connecting genes to molecules, which is something that, you know, we … JGI projects over the years starting with, you know, the CSP that we did and then leading up to today to some …