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… provided by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA extraction and RNA preparation.  JGI sample QC protocols can be found here . DNA Extraction Protocols: … Tips for High Molecular Weight DNA extraction: …

… Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating … CSP Large Scale Proposal #1 … CSP Large-Scale LOI #1 … CSP Large-Scale LOI #2 … CSP New Investigator Submission … CSP Functional Genomics Submission …

… FY22 and later through the Community Science Program (CSP), Facilities Integrating Collaborations for User Science … For DNA synthesis projects: data are subject to a  two-year … Inventory of Composable Elements (ICE) repository and/or DNASU Plasmid Repository) at the end of the embargo period. …

… don’t know a lot about them by their mate, what their role in nature, how have they been selected for or how do … a marine actinomycete bacterium. So they look kind of like fungi but also make these mycelia. They kind of look like … to hear from you. We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural …

… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, … Deliverables Cycle Time FY25 Q1  (median/75th percentile*) DNA Synthesis Constructs <5kb in size Single gene or … and improved.  Semi-manual. Assembly, annotation ( IMG ), methylation analysis 131/176 Microbial Single Particle Sort …

… local environments, and so they don’t transfer a lot of DNA back and forth, especially across species. And so then … anticancer or immune modulatory assays to see what role the compound might be playing in the system and then … working on that aspect and it’s quite active against some fungi. But we’re also really interested in distribution. So …

… that is often done, where we’re really just looking at DNA sequences, and we don’t always know necessarily or pay … nothing for. We’re also working on organisms, pathogenic fungi like Candida aureus in the lab and we work on … DNA synthesis, metabolomics. Where do you see the role of a big place like JGI in terms of helping out your …

… 1) Review JGI sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the … project. It is imperative that users properly assess DNA or RNA mass prior to shipment to the  JGI. The documents … of Sample QC Sample Quality and Contamination JGI’s Genomic DNA Sample QC Protocol JGI’s Total RNA Sample QC Protocol …

… The CSP and FICUS calls are open to both domestic and … Agreement must be signed before work can begin, and all CSP proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to the CSP New Investigator call, investigators may have existing …

… initial work was very labor intensive. But it gave us a basal training set we could use to build more sophisticated … it was worth putting that time into. ALISON:  What was the role of potential collaborators? Like, what did you pitch to … to hear from you! We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural …

… natural products for agriculture, and his upcoming new role as the Society for Industrial Microbiology and … our work in sequencing and genome mining with using DNA synthesis to express clusters metabolomics to be able to … NIGEL MOUNCEY: Yeah, so we put out a strategic plan in 2018. And in building that plan, we thought about secondary …

… the exploration of secondary metabolites across bacteria, fungi, algae and plants. These molecules, which are not … Studying how these compounds are biosynthesized and their roles in the environment, can unlock new avenues for … reservoir of secondary metabolites produced by bacteria, fungi, algae and plants. These compounds are key to …