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Special Initiatives & Programs
… and should generally conform to the guidelines for our  CSP Large Scale call .  Process Proposals may be submitted … Berkeley National Laboratory: This center concentrates on “model” crops of rice and Arabidopsis, in the search for …
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User Programs
… to the user and no granting of funds.   Proposal Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics Status CLOSED CLOSED ONGOING ONGOING …
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The More the Merrier: Making the Case for Plant Pan-genomes
Brachypodium model system traces polyploid genome evolution. Flowering … appeared in  Nature Communication s. The team studied  Brachypodium hybridum , a polyploid resulting from the …
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Frequently Asked Questions: Proposal Submission
… in. All proposals must be written in English. … The CSP and FICUS calls are open to both domestic and … Agreement must be signed before work can begin, and all CSP proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to the CSP New Investigator call, investigators may have existing …
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John Vogel
… genomic resources that fostered the widespread adoption of Brachypodium distachyon as an experimental model for the … significance of plant pan-genomes including understanding polyploid genome evolution in a pan-genomic context. … BS in … Grass Brachypodium distachyon.  Nature. 463: 763-768 … 2018-present Member, EcoFAB steering committee 2014-present …
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Partnerships Development Team
… industry engagement through three primary routes:  … The CSP provides the scientific community at large with access …
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Tracking the ancestry of known and ‘ghost’ homeologous subgenomes in model grass Brachypodium polyploids
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Data Policy
FY22 and later through the Community Science Program (CSP), Facilities Integrating Collaborations for User Science …
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Metagenome Program
… metagenomic data with detailed characterization of model systems to explore the dynamics of microbial … analysis of biogeochemically-relevant pathways, enabling modeling of microbiomes based on functional traits. These …
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Scientific Advisory Committee
… at the JGI; and overview of the Community Science Program (CSP). A crucial job of the committee is to take the input from the CSP Proposal Study Panel on prioritization of CSP projects and, with concurrence from the DOE Office of …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… pathways, which led her to a successfully funded JGI CSP project. And we also got to talk about work at her … Yeah, so that's a new JGI project. Just came out from a CSP this year. BETSY PARKINSON: Yes. DAN: So how long do you … But what was really interesting is when I started my lab in 2018, several papers came out right in a row all about this …
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Natural Prodcast Episode 16: Marcy Balunas
… think might be happening, we’re sort of converging on this model of this being called an egg defense model. And so maybe there are compounds in there that we … on increasing computational skills among biologists JGI CSP Proposal: Metagenomic mining of natural product …
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