Search

… cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial pathogens, and … This is a dynamic and complex ecosystem that includes bacteria, fungi, viruses. Resident viruses can be found in a myriad of bacterial strains, whereby they can modulate host …

… like that. And let’s say it eventually ends up in the sediment, there’s no oxygen and that a lot of that carbon … unless there’s enough of them around to affect their environment. So I think the classical example yeah, is biofilm … favorite bacterial community. For us, it’s these methane oxidizing bacterial communities that we like to look through …

… pathways, which led her to a successfully funded JGI CSP project. And we also got to talk about work at her … But what was really interesting is when I started my lab in 2018, several papers came out right in a row all about this … --really high. DAN: Yeah. Graduate school is a pressured environment, right? JACKIE: Yes. DAN: And so there's always-- …

… molecule of water. DAN UDWARY: Mhm. So oxygenases, they’re oxidizing other molecules. ALISON NARAYAN: Correct. Correct. … flavors. So non-heme enzymes, it just means that they need iron. DAN UDWARY: Right. ALISON NARAYAN: They have iron in their active site, but it’s not in the form of a …

… The CSP and FICUS calls are open to both domestic and … Agreement must be signed before work can begin, and all CSP proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to the CSP New Investigator call, investigators may have existing …

… to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those associated with … These insights are crucial for addressing key environmental challenges, such as improving soil health, carbon … populations of bacteria and archaea in their natural environments using single cell approaches. This includes …

… be fun to be able to look at a cousin organism from marine sediments. And so JGI was interested in that and they worked … of the most notorious toxins there are in the marine environment. And it was that year that the Pacific Northwest … JGI projects over the years starting with, you know, the CSP that we did and then leading up to today to some …

… they spread, why do they spread in a certain way from one bacteria to another, how do they change then, and why are … which is still hard to do. We are mining a lot of environments to see where are environments that have the most … But we also have, in collaboration with other people, lake sediments. We have microbiomes from different organisms, …

… the user and no granting of funds.    Proposal Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics JGI-TMF Critical Minerals and …

… on an old rum still, which– you’ve got this very sugary environment. It’s a compound that clearly kills things that … just been cataloging who’s there in these different environments. And now it’s really about what are they doing. … NIGEL MOUNCEY: Yeah, so we put out a strategic plan in 2018. And in building that plan, we thought about secondary …

… been dominated for … well, as long as I can remember, by bacterial research.  So it was great to hear her passion and … a bunch of microbes, all talking to each other in every environment you can think about.   DAN: What kind of genomic … fungi… Oh, the fungi vary in number of chromosomes. Like, ironically, yeast, which has a small genome has 15 …

… notable research and scientific collaborations in 2018. The cover is an image of Mono Lake, a saline soda lake … mobility and to better understand their roles in the global sulfur cycle. Copies are available online – click here to go … will be available the annual JGI Genomics of Energy & Environment Meeting in San Francisco …