Search

… as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating … communities … CSP Large-Scale LOI #1 … CSP Large-Scale LOI #2 … CSP New Investigator Submission … CSP Functional Genomics Submission … FICUS Example #1 … FICUS …

… call is for PIs who have never led a JGI project, and the Functional Genomics call is for projects that translate … into biological function. The  New Investigator and Functional Genomics calls do not require an LOI.  Projects … completion of a project, the JGI makes the assemblies, gene annotations, and analyses available to the community at …

Program leads to discuss available options. Note: In 2021, we conducted an extensive internal product audit to … clone depends on project DNA Synthesis Combinatorial libraries Multiple genes synthesized and cloned into a … short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) 256/404 Fungal Standard Draft Whole …

… the samples, and the sample QC results. … Analysis and annotation of publicly available projects can be accessed … ) The following tools are available for functional annotation/curation of your genomes Microbial (IMG–ER) …

… the scientific community as a user facility pioneering functional genomics to solve the most relevant bioenergy and … completion of a project, the JGI makes the assemblies, gene annotations, and analyses available to the community at …

… the quality of single-cell genomes and directly link functional information with individual cells. Research Team  … measure environmental microbiome activity levels.This functional assay lets us move beyond cataloging the genes of … of metabolic activity (BONCAT+FACS). To provide additional functional insights into microbial genomes, the JGI now uses …

… strains. This approach allows for the identification of key functional traits that have direct applications in bioenergy … pangenomes, and integrate multi-omics tools to enhance functional studies. These efforts seek to improve … its major branches for users to characterize and propagate annotations across fungi. Myco-Ed Genomics Initiative   …

… with gene expression, providing deeper insights into functional genomics. A key focus is understanding the … but highly recommend using the workflow in  GNPS2 .   … In support of user science, the JGI Metabolomics … … Metabolomics Offerings & Capabilities … Metabolite, Annotation and Gene Integration … Metabolomics Program in …

… that morning cup of coffee, that is a plant that has a functional activity. It’s a pharmacological agent that acts … screening plant natural products, and other natural product libraries, so not relying on single crystal X-ray … of platforms like GNPS, it’s very poor in terms of annotations on plant natural products. Rich, rich in …

… to no genetic tools enabling heterologous expression and functional exploration.  The developed strains represent an …