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Disclaimer
… of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231. Accordingly, the U.S. Government retains a … The JGI is not responsible for the contents of any off-site pages referenced. …
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Environmental Genomics Group
… into DNA by active microbial populations (Hungate et al. 2015). With the development of high-throughput SIP (Nuccio et al. 2022) and terabase-scale metagenome combined assemblies … Acids Research , Volume 51, Issue D1, 6 January 2023, Pages D723–D732, https://doi.org/10.1093/nar/gkac976 Roux, …
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Natural Prodcast Episode 17: Cassandra Quave
… has a book called The Plant Hunter and I’ve read all 400 pages of her life and I feel like I have a new friend that … the convention went– since the protocol went into force in 2014. There’s now a website that has a lot of resources that … plants and bringing them back is not your jam, the good news is there’s this amazing resource that can be provided …
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New Lineages of Life Group
… list available at Google Scholar. Dutkiewicz, Z. et al (2025) “ Proposal of Patescibacterium danicum gen. nov., sp. … ISME Communications , Volume 5 Issue 1. Wittmers, F. et al (2024) “ Non-photosynthetic lineages sibling to Cyanobacteria …
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Natural Prodcast Episode 22: Alison Narayan
… has to do with the mechanism. And so these enzymes use O2, and one of those oxygen atoms gets incorporated into our product, and one of those oxygen atoms from O2 ends up as a molecule of water. DAN UDWARY: Mhm. So … library within that family as possible. There’s one more category of sequences that we worked with JGI on, and those …
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CSP New Investigator Call
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Natural Prodcast Episode 14: Nigel Mouncey
… never forced it on me, but we always had these scientific news magazines lying around at home. And I would just pick … screening platform where we’d look at 10,000, 15,000, 20,000 mutants a week. We started doing a whole bunch of … 30 to September 1st. The link is found all over JGI’s web pages.  DAN: And I will put it in the show notes along with …
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Natural Prodcast Episode 15: Katherine Duncan
… inside them. And this was, I think it must’ve been about 2001, maybe, and so it was before smartphones and before … It’s them that do it. They created the Wiki. They edit the pages. They add the content. They run the Twitter account. … the ideas. And they say, wouldn’t it be cool if there was a page on this? And they add it. And they did a review paper …
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Natural Prodcast Episode 4: Nancy Keller
… we discussed in the primer podcasts ( part 1 here , part 2 here , and part 3 here ), which you should be able to find … conference, which took place a few weeks ago, in January of 2020. So, you might hear us referencing a conference, and … (SIMB) Natural Products meeting in San Diego in January 2020. You can find the podcast on Apple , Google , Spotify , …
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FICUS-NERSC/KBASE
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that … origins and mechanisms of pathogenesis . Science. 2006 Sep 1;313(5791):1261-6. doi: 10.1126/science.1128796 Science News of the Day: Stokstad E. Genetics. Genomes highlight …
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Mining Metagenomes for Cas Proteins
… acids (aa) in size, half that of previously known class 2 CRISPR enzymes that are typically 950—1400 aa. They were initially identified by searching for Cas12d homologs across IMG/M’s assembled metagenomic data. It … out that some of these were shorter than the typical Cas12d proteins and were also found next to cas1 genes. Further …
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