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Microbial Program
These insights are crucial for addressing key environmental challenges, such as improving soil health, carbon … from environmental samples.  … The IMG/M system serves as a community resource for comparative analysis and annotation … of plasmids automatically identified from genomes, metagenomes, and metatranscriptomes. It provides rich data …
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Natural Prodcast Episode 17: Cassandra Quave
… more about natural products and drug discovery, or the challenges of academia, or if you want to understand what … copies of this and we were able to distribute it across the community. So that’s been used in supporting educational … Selfishly, what can or should we be doing to help the plant community to understand more about plant natural products? …
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Critical Assessment of Metagenome Interpretation: the second round of challenges
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Natural Prodcast Episode 12: Nadine Ziemert
… what’s an example where that happened, where your view was challenged? NADINE ZIEMERT: Good question. I don’t remember … fascinating, I think. DAN UDWARY: Yeah, and that was a JGI Community Sequencing Project. You’re right, yeah. NADINE … that easily can identify secondary metabolite pathways in metagenomes, which is still hard to do. We are mining a lot …
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JGI Portals
… platforms are a key resource for the broader scientific community and require constant developments to meet the … … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to all … metadata, around the world. … The IMG/M system serves as a community resource for comparative analysis and annotation …
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Micro-Scale Applications Group
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Homepage
…   Gain access to omics technologies generating community data at zero cost —  submit a proposal.  …
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Partnerships Development Team
… three primary routes:  … The CSP provides the scientific community at large with access to high-throughput sequencing … visit the Intellectual Property Office  here . … The Community Science Program … Strategic Partnership Projects … …
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Natural Prodcast Episode 6: Marc Chevrette
… than screening in the past, is in the types of pathogens or challenges where we’re putting these bugs and assays … Currie’s metagenomics research, enabled in part by JGI’s Community Science Program.] So that’s one example where we … is looking at secondary metabolism through the lens of a community. So almost all of natural products research to …
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How to Submit Sequencing Samples
… sends Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… it your baby in being released and how this can help the community. DAN UDWARY: Yeah. So OK. So SMC is the Secondary … the rest of the archaea and fungal genomes and then work on metagenomes. So yeah. So we’ve taken every public sequence … my machine in order to do it. [CHUCKLES] JACLYN WINTER: Challenge them. DAN UDWARY: I’m into it. Yeah, totally. …
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Programs & Platform Leads
… carbon cycling and biogeochemistry. In complement to the Community Science Program, JGI researchers drive innovations … Data Science & Informatics. The JGI also sustains a vibrant community of postdoctoral and early career researchers. …
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