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Viral Genomics Group
Microbes drive critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by viruses. Research in the viral … al. (2019) Minimum Information about an Uncultivated Virus Genome (MIUViG).  Nature Biotech .  37 , 29–37 Roux S, et …
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The More the Merrier: Making the Case for Plant Pan-genomes
Brachypodium model system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the …
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Project Management Office
PMO works with users, JGI scientists and technical staff to onboard users and guide them through the process of working … launching the user’s project. See below for details on each step. … Please review our FAQ in advance of contacting the PMO office.  … Before work can start on any …
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Mission
JGI Mission As a U.S. Department of Energy Office of Science user … Biological and Environmental Research program, the Joint Genome Institute provides advanced genomic capabilities, … see below.  … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a DOE Office of Science User …
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Offerings & Capabilities
The central mission of the JGI’s Genomic Technologies department is   … categories: Sequencing, Synthesis and Metabolomics. Strong internal collaborations with  Science Programs and  Operations enable the JGI to …
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Natural Prodcast Episode 11: Marnix Medema
Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural products and the science and scientists of secondary metabolism. Hey there, and welcome back to Natural … will be episode 11. This continues our little sprint on genome mining. In the last episode , Alison and I talked …
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Natural Prodcast Episode 14: Nigel Mouncey
… … DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . … off today with my interview with the Director of the Joint Genome Institute and head of the Secondary Metabolites … boss is Nigel Mouncey, and he’s the director of the Joint Genome Institute. And so anybody who’s listened to other …
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Metabolomics Program
… them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … metabolites, genes, and proteins. It also enables exploration of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With advanced mass …
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Fungal & Algal Program
… and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … culture collections to produce hundreds of diverse algal genomes, which will be made accessible through the PhycoCosm …
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Community Science Program
… projects of relevance to Department of Energy (DOE)  Mission Areas . Through this program, the DOE aims to advance genome science-based scientific research from a broad range … is for PIs who have never led a JGI project, and the Functional Genomics call is for projects that translate genomic …
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Products
… in: DNA and RNA sequencing, Sample and library preparation, DNA synthesis and pathway engineering Mass spectrometry … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) 256/404 Fungal Standard Draft Whole genome shotgun sequencing using long-read sequencing. Exact …
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Natural Prodcast Episode 20: Brian Bachmann
… … DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. … in the early 2000s called Ecopia, which was a very early genome mining company, back when DNA sequencing of natural … around drug discovery, which includes screening methods, genome mining in cave microbiomes, and using engineered …
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