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… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  … systems, like bacteria, where we figure we can make more progress faster, which is sometimes true. Other people, like …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility at Lawrence Berkeley National Laboratory … Lab), is to become the leading integrative genome science user facility enabling researchers to solve the world’s evolving energy and environmental challenges.   …

Vision  Lead genomic innovation for a sustainable bioeconomy. Mission  As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic capabilities, …

… effort in functional genomics since 2012, with a focus on addressing critical energy and environmental … design and synthesis capabilities accelerate progress in the Design-Build-Test-Learn cycle, helping … by the Joint BioEnergy Institute for managing information about biological parts, capable of recording information …

Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural products and the science and scientists of … and I talked about the basics of genome mining, which is using DNA sequence to identify and interpret biosynthetic, … not in this field either. So they used antiSMASH and they report findings using antiSMASH. And it’s actually quite a …

… and now COVID. We also wanted to talk to her because she’s written a book about her life and her science, called The Plant Hunter , … no way to be 100% sure that the chemistry that they’re even reporting on is from the plant they say they’re working on. …

So we’ve got Kate here today, and we wanted to talk to her about a whole list of things. So we have a Scripps … and we want to talk about molecular networking, because I really enjoyed the review that you wrote with Marnix … able to, say, see biosynthetic pathways? Or can we see a progression in metabolites and metabolite families? Or are …

… we recorded in my hotel room at SIMB, or the Society for Industrial Microbiology conference that took place in January … this happen. We had a really fun conversation with Roger about all this, in terms of how to build an international … define standards for the minimum information that should be reported. And to develop a schema by which you can report …

JGI Mission As a U.S. Department of Energy Office of Science user facility supported by the Biological and Environmental … as a national user facility, and has grown to serve a worldwide community of more than 2,000 primary users—those … coastal or terrestrial systems. Additional information about DOE’s Biological and Environmental Research program …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  … a User Facility means that scientists from all over the world bring us big problems related to energy and the …

… into data science.  Research in the Kyrpides group focuses on Microbiome Data Science and analysis of Big Data. … bacteriophages. Cell . 185(21):4023-4037 Nayfach S, et al. (2021) Metagenomic compendium of 189,680 DNA viruses from the … Bowers RM, et al. (2017) Minimum information about a single amplified genome (MISAG) and a …

… you guys. Schedules are hard. But, I’m working on it because I really do want you all to hear this great conversation … stuff with cool bacteria that I’m fascinated to learn more about. He works with methylotrophs, which are a group of … by Inverse Stable Isotopic Labeling . ACS Chem Biol. 2021 Aug 20;16(8):1332-1338. doi: 10.1021/acschembio.1c00329. …