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Plant Program
… will accelerate gene discovery. BrachyPan on Phytozome (see Brachypodium Resources below) PennyPan on Phytozome … Brachypodium distachyon is an annual grass researchers use … manipulation in the laboratory. Both germplasm (sequenced mutants and natural accessions) and protocols …
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Sequencing Technologies & Products
… through end-to-end automation — and further advancing sequence applications, single cell genomics, biodesign, and … [QA/QC]), large-scale liquid handling automation, and sequence analysis. … access to cutting-edge cell sorting, DNA amplification, and sequence analysis to recover the genomes of uncultivated …
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Sequencing Submission Requirements for DNA Synthesis
… When submitting sequences to the JGI DNA Synthesis program, please include … Sequence files for all constructs should be emailed to  … several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank files. ApE is an …
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Plant Microbial Interactions Group
… single-cell atlas comprising Sorghum, Switchgrass, and Brachypodium datasets. We recently profiled the association …
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The More the Merrier: Making the Case for Plant Pan-genomes
… Brachypodium model system traces polyploid genome evolution. … appeared in  Nature Communication s. The team studied  Brachypodium hybridum , a polyploid resulting from the … of the genomes from the diploids  B. stacei and  B. distachyon , a relative of the candidate bioenergy crop …
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John Vogel
… genomic resources that fostered the widespread adoption of Brachypodium distachyon as an experimental model for the grasses. In … on developing plant functional genomic resources (e.g. sequenced mutant collections, transformation technology, … Brachypodium distachyon is a small annual grass that is well …
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Agrobacterium‐Mediated Transformation of Brachypodium distachyon
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Genome sequencing and analysis of the model grass Brachypodium distachyon
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Sequencing and functional validation of the JGI Brachypodium distachyon T‐DNA collection
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How to Submit Sequencing Samples
… pipelines.  You will receive automated emails as raw sequence data becomes available, and as analysis is …
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EARLY FLOWERING 3 and Photoperiod Sensing in Brachypodium distachyon
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Genetic Architecture of Flowering-Time Variation in Brachypodium distachyon  
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