Search

… datasets sequenced at the JGI. IMG/M is also open to scientists worldwide for the annotation, analysis, and … Microbial Genomes (IMG) system serves as a community resource for analysis and annotation of genome and metagenome … is a collaboration between the JGI and the Computational Biosciences Group at the Computing Sciences Research Division …

The JGI’s Science Programs offer support to users and their research efforts.  JGI scientists lend their expertise to enhance the scientific … for and with users, and create computational tools and resources for them. Their concerted efforts help maximize the …

… a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential … and catalyzing a major transition of biology into data science.  Research in the Kyrpides group focuses on … NC. et al. (2016) Microbiome Data Science: Understanding Our Microbial Planet. Trends Microbiol. 24(6):425-7. …

… are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, including … 10.1016/j.celrep.2019.04.054 10.1371/journal.pbio.2002860 … Postdocs: Margot Bezrutczyk (JGI Postdoc) Lamprinos Frantzeskakis (JGI Postdoc) Interns: …

With collaborative user projects, the JGI’s Plant Program delves into the natural world’s … interactions, advancing efforts to create renewable energy sources and bolster agricultural resilience. The program’s … that are the most important to DOE mission and plant science. These species form the basis of plant research in …

The Community Science Program (CSP) provides the scientific community at … sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  … of disciplines. Three calls fall under the umbrella of our CSP: The Large Scale call is for expansive projects that …

The JGI’s Microbial Program focuses on using cutting-edge … including those associated with microeukaryotes, enhances our understanding of terrestrial biogeochemical cycling and … single-cell sequencing, resequencing, RNA sequencing and epigenomics. Expansion of sequence space:  The JGI generates …

… metabolic properties encoded within those genomes. Our aim is to more fully capture microbial and viral … communities and ecosystem function.  The Environmental Genomics group also hosts the Viral Genomics group . … Clum, A. et al. (2021)  DOE JGI metagenome workflow …

… described by Stanley and Konopa in 1985, which highlights our skewed understanding of microbial metabolism towards a … focused on the application of  function-driven single-cell genomics . Here, single cells are characterized and selected … Director of Product and Market Development, Twist Bioscience Scott Clingenpeel: Industrial Hygienist, Berkeley …

… constraints exerted by viruses. Research in the viral genomics group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host …