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Before 2006, Olpidium was one of the many obscure fungi of … link in the evolution and transition of fungi from aquatic to terrestrial habitats. The work is part of the JGI’s 1000 … turned out to be a mixture of genetic material with various origins, ranging from fungi, plants to bacteria. Back in …

FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 … target is based on 98% of the total available hours.   FY 2018 DOE Metrics There were 1,882 unique* JGI users in …

The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental … strains. This approach allows for the identification of key functional traits that have direct applications in …

… cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … interactions. These insights are crucial for addressing key environmental challenges, such as improving soil health, …

Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of … the Hungate1000 Collection.” Nat Biotechnol 36(4): 359-367 (2018). Woyke T ., Doud D. F. R., Schulz F. The trajectory of …

… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … discoveries and catalyzing a major transition of biology into data science.  Research in the Kyrpides group focuses on … hosts (Nature 2016, Science 2017, Nature Microbiology 2018), discovery of new genes with important …

The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with … providing deeper insights into functional genomics. A key focus is understanding the interactions between  plants, …

Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … for fundamental growth, provide critical advantages to the organisms producing them, and are often involved in … by bacteria, fungi, algae and plants. These compounds are key to organisms' interactions with their environments and …

JGI Mission As a U.S. Department of Energy Office of Science user facility supported by the … capabilities, large-scale data and professional expertise to support the global research community in studies of … processes that control the environmental fate of key elements with an impact on BER’s energy and …

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine … binning of a giant virus. mSystems. 5 (3) Schulz et al. (2018) Hidden diversity of soil giant viruses. Nature …

… user projects, the JGI’s Plant Program delves into the natural world’s potential to address global … The program is working to expand genomic resources for key plant species, enhancing our understanding of plant … to enable advanced methodologies for determining gene origin and function. These species are carefully selected by …

… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … pathogens, and associated viruses that all contribute to a dynamic ecosystem. We are interested in how plants … genomics to better understand the plant-associated terrestrial world. Research Team    … Plant microbiomes hold …