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… integral components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, … system … As part of this project, pairwise average nucleotide identities (ANI) and fraction of orthologous … Sciences Research Division of LBNL. … Focus Areas … Average Nucleotide Identity (ANI) … Integrated Microbial Genomes …

The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the … innovative screening technologies and computational tools that enhance biofuel production and biosystem design. …

…   The JGI’s Secondary Metabolites Program focuses on the exploration of secondary metabolites across … support users, our efforts include developing computational tools for predicting biosynthetic gene clusters (BGCs), …

The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their … and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … fungal and algal pangenomes, and integrate multi-omics tools to enhance functional studies. These efforts seek to …

The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to … advanced mass spectrometry techniques and computational tools, the program supports foundational research related to …

… collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global challenges by exploring plants’ role in capturing … behind phenotypic evolution. It also utilizes advanced tools, including deep learning algorithms for gene …

The Joint Genome Institute's DNA Synthesis Platform capabilities support researchers exploring how to convert sequence … group and focused on new technologies and optimizing tools — including strain engineering — to make them more …

… that support the JGI’s Synthetic Biology Program .  Representative software includes: gRNA-SeqRET , an organism-agnostic CRISPR gRNA design tool BOOST , which provides a suite of tools to automate …

The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural … evolution. The Program focuses on developing computational tools and visualization resources that support user analysis …

… one. My new co-host, Jackie Winter, has been on a few episodes now, and I figured we were way overdue to give her a … of always working on natural products but just different tools and how to really access and manipulate these pathways … some kind of weird thing that happens in every BGC. And one nucleotide difference can throw everything off in terms of …

The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. … available genomes from three domains of life. It provides tools for analyzing the functional capability of microbial …

… splitting his time between Bill Gerwick’s lab and doing research in Panama through support from the ICBG training … and it’s this great program funded by the National Institutes of Health and the National Science Foundation to create … we’re now very much – we’re interested in how we can build tools which will let us see the whole landscape of natural …