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… The Metagenome Program uses advanced sequencing technologies to … and characterizing microbial diversity, work in the Metagenome Program uses several experimental approaches to … The Metagenome Program focuses on the high-throughput sequencing … over ecological and evolutionary time scales.The Metagenome Program combines large-scale, time-series …

… computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … applications. By recovering population genomes from metagenomes, we gain insights into microbial interactions, … high-throughput SIP (Nuccio et al. 2022) and terabase-scale metagenome combined assemblies (Hofmeyr et al. 2020) we are …

… addressing key environmental challenges, such as improving soil health, carbon sequestration and bioeconomy … capability of microbial communities based on their metagenome sequence, in the context of reference isolate … of plasmids automatically identified from genomes, metagenomes, and metatranscriptomes. It provides rich data …

… and virus genomes have been assembled and reported from metagenomes, our understanding of the impacts of these … Genomics group attempts to address this question in natural soil ecosystems by combining metagenomics with other omics … by snowmelt and host dynamics in a high-altitude watershed soil ecosystem. Microbiome 11, 237. …

… the program supports foundational research related to soil nutrient cycling and health, terrestrial biogeochemical … samples — including microbes, fungi, plants and soils. Through a combination of experimental workflows and … the interactions between  plants, microbes, and soils relevant to key environmental processes and the …

… by exploring plants’ role in capturing carbon, detoxifying soils, interacting with other organisms, and adapting to … of how plants have naturally adapted to varied climate and soil conditions around the globe to identify genes to … are small plastic growth chambers where plants grow without soil. Using EcoFABs allow researchers around the world …

… that easily can identify secondary metabolite pathways in metagenomes, which is still hard to do. We are mining a lot … of these environments? NADINE ZIEMERT: So we started with soil. But we also have, in collaboration with other people, … all the time. We have compared three very different soils in the area around Tübingen that is almost next to …

… metabolites and unidentified features in spectra. 167/214 Metagenome Metatranscriptome Environmental transcript … sequence Assembly, annotation ( IMG/M ), mapping 273/273 Metagenome Cell Enrichments Obtained by physical separation … Assembly, annotation ( IMG/M ) Depends on project Metagenome Minimal Draft Low-coverage short-read assembly & …