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Plant-Microbial Interactions Group
… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … in a myriad of bacterial strains, whereby they can modulate host metabolism, gene expression and phenotype. We have recently identified resident bacteriophages (viruses infecting bacteria) in the plant …
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Microbial Program
… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … of terrestrial biogeochemical cycling and inter-organismal interactions. These insights are crucial for addressing key … metatranscriptomes. It provides rich data such as inferred host taxonomy, conjugation potential, antibiotic resistance …
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Natural Prodcast Episode 8: Eric Schmidt
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … together to make small peptides. Those are fun, because the host organism can use whatever amino acids it has access to, … predators from eating them. And so there’s a long history. There’s, I think, 60 years of history now of people …
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Viral Genomics Group
… group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host dynamics in environmental microbial communities. This … challenges of host prediction methods for uncultivated phages.  Current Opinion in Virology .  49 , 117-126 Berg, …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… schedule. This should be coming out on the first Thursday of the month, just like I promised. Now I just have to make … over our interview with Dr Elizabeth (or Betsy) Parkinson from Purdue University. She’s in the Department of Chemistry … yeah. If you can expand that repertoire, then yeah, you're helping things a lot for sure. JACKIE: So this will …
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Natural Prodcast Episode 17: Cassandra Quave
Prodcast episode 17. The guest we have this week is Professor Cassandra Quave from Emory University, with joint … her podcast, “Foodie Pharmacology,” where she talks about history, medicine, cuisine and chemicals. The conversation … naturalprodcast.com . Special thanks, as always, to my co-host Alison Takemura. If you like Alison, you want to hear …
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Partnerships Development Team
Developed in 2017, the PDT was established in part to help better-connect industry to JGI resources, as well as … works closely with the Berkeley Lab Intellectual Property Office to facilitate these new interactions.  The PDT enables industry engagement through …
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Metagenome Program
… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … ecosystems.  By studying microbial communities and their interactions, the Program aims to unlock the fundamental … how microbes contribute to ecosystem functions, the Program helps drive innovations that could advance our understanding …
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … getting.  The other thing is really remarkable. So, as a history, right, if I am using probably a most simple-minded … at naturalprodcast.com Special thanks, as always, to my co-host, Alison Takemura. <woohoo> If you like Alison, and want …
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Natural Prodcast Episode 24: Jackie Winter and SMC
Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A little bit of a bonus episode, since … but instead it’s two interviews in one. My new co-host, Jackie Winter, has been on a few episodes now, and I … in high school, but I was taking AP classes in English and history so that didn’t– I wasn’t interested in science as …
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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with … plants and microbes, and understanding microbiome interactions. The  insights derived are crucial for … and bioenergy development. … EcoFABs:  For studying microbe-host (or plant-microbiome) interactions under controlled …
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Natural Prodcast Episode 1: The Primer, Part 1
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … of background. My name is Dan Udwary. I – as well as my co-host, Alison Takemura, whose voice you’ll hear in a minute – … field with very real and truly amazing science with a long history, and that’s what we’re going to be talking about …
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