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FY 2025 DOE Metrics Sequencing Quarter Total Bases … metagenomic, or plant genomes. [Download PDF] End-of-year Goal – Develop one new computationally enabled approach … are producing data.   FY05-07 Sequencing Goals and Results Fiscal Year Sequence (GB) Operating Hours Targets Actual* …

… welcome back to Natural Prodcast, and this will be episode 11. This continues our little sprint on genome mining. In … of genome mining, which is using DNA sequence to identify and interpret biosynthetic, secondary metabolism … that, I wanted to tell a quick story. Looking back, the year was probably 2010, 2011, I was a, uh- actually, I’ve …

… of this policy) produced through all user projects accepted FY22 and later through the Community Science Program (CSP), … or metabolomics projects: data are subject to a  one-year embargo .  For each data or analysis product (raw or … … For DNA synthesis projects: data are subject to a  two-year embargo starting at construct or strain delivery.  …

… letters of intent and submissions at the bottom of the page.  … Review the list of open calls ; click on the call … view the proposal templates, go to the proposal submission page , login using your JGI account (create one here if you … Release Policy. Learn more on our Data Policy & Support page.    … Sample requirements for sequencing projects can …

… science, and all online and free. We had to cancel last year’s event due to COVID, but this year we’re holding the … express clusters metabolomics to be able to actually identify and possibly even quantify the products coming from these … Metabolites Science Program . Since his arrival in 2017, Nigel has led a vision for the JGI that sees secondary …

… genomes and their predicted hosts (Nature 2016, Science 2017, Nature Microbiology 2018), discovery of new genes with … variants and new CRISPR-Cas types) (Nature Communications 2017, Science 2018, Molecular Cell 2019) and massive … the human gut microbiome. Nature Biotechnol.  39(1):105-114. Schulz F, et al. (2020) Giant virus diversity and host …

… been an active user of the JGI at any time in the past two fiscal years is eligible for election to the UEC. Terms are 3 years … Anyone can nominate, but only users active in the last fiscal year can vote or be elected. Voting is electronic and …

… of microbial single-cell sequencing. Nat Methods 14(11): 1045-1054 (2017). Schulz F., Yutin N., Ivanova N. N., Ortega D. R., Lee … translation system components.” Science 356(6333): 82-85 (2017). Mukherjee S., Seshadri R., Varghese N. J., …

… genomics and phylogenomics) and machine learning to identify new divergent lineages and expand the Tree of Life. We … viruses. Nature Communications. 9 (1), 1-9 Schulz et al. (2017) Towards a balanced view of the bacterial tree of life. Microbiome. 5 (1), 1-6 Schulz et al. (2017) Giant viruses with an expanded complement of …

… show notes, which you can always access through JGI’s webpage at  naturalprodcast.com , along with transcripts and … program. And I’m a scientist here. And have been for 18 years. (LAUGHS) DAN UDWARY: All right. Easy start. What does … CSP call. That call is supposed to come out in early next year. Same for the FICUS, we’re working with EMSL and DOE …

… view a downloadable pdf of accepted proposals from previous fiscal years for our Community Science Program (CSP) as well as the …

Foster and too many others to name at JGI for the last two years or so. SMC is now released and ready for the public to … about natural products. So in Brad’s lab, I worked on identifying and characterizing haloperoxidases from bacteria. And … you go to the website, which is smc.jgi.doe.gov , the stats page is showing me that right now we have just over a …