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Natural Prodcast Episode 14: Nigel Mouncey
… available, but no worries, she’ll back next time! We’ve already got lots of great talks recorded and on the way – I’m … community. A few examples of those are obviously expanding the diversity of known secondary metabolites and … Metabolites Science Program . Since his arrival in 2017, Nigel has led a vision for the JGI that sees secondary …
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Natural Prodcast Episode 12: Nadine Ziemert
… of secondary metabolism. Welcome back. This will be episode 12 of Natural Prodcast. And it’s our conversation with … around because it’s too late. They should be asleep already. But we’re not just here to talk about us. We have a … all these 120 genomes, and each of them have– I don’t know– 30 gene clusters or so. So I think I spent two years only …
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Microbiome Data Science Team
… genomes and their predicted hosts (Nature 2016, Science 2017, Nature Microbiology 2018), discovery of new genes with … the sequencing and comparative analysis of thousands of archaeal and bacterial type strains ( GEBA-type strains … of Earth’s microbiomes. Nature Biotechnol . 39(4):499-509. Danko D. et al. (2021) A global metagenomic map of urban …
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Single Cell Research Group
… the gap between cultivated and uncultivated Bacteria and Archaea has steadily been widening since 2005. This gap is … single-cell sequencing. Nat Methods 14(11): 1045-1054 (2017). Schulz F., Yutin N., Ivanova N. N., Ortega D. R., Lee … E.M. Stop codon reassignments in the wild. Science 344, 909-13 (2014). Rinke C., Schwientek P., Sczyrba A., Ivanova …
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Natural Prodcast Episode 23: Aaron Puri
… that grow on one-carbon compounds like methanol and methane. And I really dove into microbial physiology and … nice summer day in Seattle I think this was like 2013 or 2014. And antiSMASH — I know you’ve interviewed Marnix … access to the whole sigma catalog of precursors in their 12C form. You can feed those and look for incorporation in …
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DOE Metrics
… % Goal FY 2025 Total 700.0     8,585     Q1 2025 175 190.304 109% 2,164 2,136 98.7% Q2 2025 175 152.100 87% 2,117 2,112 … target is based on 98% of the total available hours.   FY 2017 DOE Metrics 1,598 unique* JGI users in FY2017 …
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University of California, Merced Internship Program
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The Expanding Universe of Methane Metabolisms in Archaea
Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. Methane is a greenhouse gas 20 times more potent than carbon … of anaerobic environments suggest the diversity of methane metabolisms is “vastly underestimated.” In the March 4, …
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Alabama Agricultural & Mechanical University Internship Program
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Microbial Program
… vast and diverse world of microbes. Studying bacteria and archaea, including those associated with microeukaryotes, … microbial diversity — with an emphasis on bacteria and archaea, and including those associated with … lineages that are important for bioeconomy applications. By expanding our knowledge of microbial functions and …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… a third less than the normal amount that we get, which is already a fairly small number. We’re a very niche podcast. … Great Salt Lake, which is a hypersaline terminal lake about 30 minutes away from campus. And we’re finding some really, … genomes. But IMG is microbial genomes — mostly bacteria and archaea. And we knew that secondary metabolism is …
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New Lineages of Life Group
… on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in … viruses. Nature Communications. 9 (1), 1-9 Schulz et al. (2017) Towards a balanced view of the bacterial tree of life. … Scientific reports. 5 (1), 1-10 Schulz et al. (2014) Life in an unusual intracellular niche: a bacterial …
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