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IMG Group
The IMG group owns and maintains integral components of JGI’s … within IMG. While ANI is integrated within IMG, ani.jgi.doe.gov serves the current data. … The mission of the …
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DNA Synthesis Program
The JGI’s DNA Synthesis Program supports a wide range of projects, … scientists to drive innovations that align with DOE's missions. … The DNA Synthesis Program plays a central … in synthetic biology engineering workflows. … The IMG/M system serves as a community resource for comparative …
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DOE Metrics
FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) … 175     2,167     *Includes Illumina and PacBio sequencing platforms. **Operating Hours target is based on 98% of the … hours.   FY 2024 DOE Metrics There were 2,456 unique* JGI users in FY2024 , which includes Principal Investigators …
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Institutional User Agreements
… data for synthesis. This agreement, required by the DOE for all work performed in its User Facilities, is a … must have their home/employing institution sign a JGI Non-Proprietary User Agreement and Appendix. An Appendix …  The recent updates were approved by the DOE to address the DNA Synthesis program. When fully executed, the new User …
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Sequencing Submission Requirements for DNA Synthesis
When submitting sequences to the JGI DNA Synthesis program, please include the following items: … … are several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank files. ApE is an …
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JGI Portals
… — top-quality genomic data, open to all researchers. … The JGI Genome Portal provides unified access to all JGI genomic databases and analytical tools for all JGI sequencing … and their associated metadata, around the world. … The IMG/M system serves as a community resource for comparative …
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Programs & Platform Leads
As an Integrative Genome Science User Facility, the JGI plays a leadership role in enabling the frontiers of research related to DOE’s missions in bioenergy, carbon cycling and … Metagenome, Metabolomics, Secondary Metabolites, and DNA Synthesis Science Programs and draw from the …
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Synthesis
The Joint Genome Institute's DNA Synthesis Platform capabilities support researchers exploring how to … assembly and analysis Overview of synthesis products The JGI DNA Synthesis platform enables users to validate …
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JGI@25
Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We revisited a number of notable … energy and environmental challenges.  Commissioned for the JGI’s 25th anniversary, the JGI mural references dozens of iconic JGI contributions to …
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Mission
JGI Mission As a U.S. Department of Energy Office of Science … a sustainable bioeconomy. ALL PROPOSALS must support the DOE/BER Mission Areas we serve, see below.  … The U.S. … and contributing this information freely to the public databases. In 2004, the JGI established itself as a national …
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How to Submit Sequencing Samples
… needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing … & quality requirements for samples submitted to the DOE JGI. Plate-based Preparation Guidelines DNA Preparation … (or completes the form online) PM submits metadata to JGI database for shipping approval (n/a if using web-based form) …
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Frequently Asked Questions: Project Management
Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA Synthesis projects: Miranda Harmon-Smith Metabolomics … products categorized by Science Program.  … The majority of JGI projects come from the user community. Find out about … request a JGI Single Sign On account at https://signon.jgi.doe.gov . This account can then be used to submit proposals, …
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