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Frequently Asked Questions: Proposal Submission
… letters of intent and submissions at the bottom of the page.  … view the proposal templates, go to the proposal submission page , login using your JGI account (create one here if you … North Korea, Cuba, and Syria), need DOE permission and authorization from other U.S. government agencies to work …
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Frequently Asked Questions: Project Management
… The “User” signing the JGI User Agreement will be an authorized representative from your institution (usually a … Go to the “ edit contacts ” page in your account. Use the form to update all information … by contacting the collaborator listed on the “info” page for that organism on the Genome Portal . …
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Disclaimer
… or the University of California. The views and opinions of authors expressed herein do not necessarily state or reflect … charge, provided that this Notice and any statement of authorship are reproduced on all copies. The JGI is not responsible for the contents of any off-site pages referenced. …
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Partnerships: Myco-Ed
… The metadata then goes into iNaturalist. Myco-Ed has:  ~50 lineages selected for sequencing 16 genomes released 20 members from 15 institutions 300+ students 800+ iNaturalist observations … Ed Fungal Genomics Education Project MycoCosm MycoEd group page Protocols, teaching materials and bioinformatics …
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Natural Prodcast Episode 18: A CSP Primer
… show notes, which you can always access through JGI’s webpage at  naturalprodcast.com , along with transcripts and … So the minimum request is 100 kb. The maximum request is 500 kb. DAN UDWARY: For DNA synthesis. MIRANDA HARMON-SMITH: … Management Office. You can find their emails on the CSP page, and I’ll link them in the show notes, which I’ll say …
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Natural Prodcast Episode 17: Cassandra Quave
… has a book called The Plant Hunter and I’ve read all 400 pages of her life and I feel like I have a new friend that … DAN UDWARY: That’s a very cool resource that I’m not terribly familiar with, though I’ve been out of the grant … than HIV/AIDS does every year in the US and it has since 2005 even though we technically have a number of different …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… that Streptomycetes use, and isolating those is not really terribly feasible. And so, in that sense, that allows us to … what we were able to do is we-- from just an initial set of 500 of these PBP thioesterases, we were actually able to … grad student or undergrad, can go and actually have their 15 minute blocks. And so they're not true-- they're not …
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Natural Prodcast Episode 15: Katherine Duncan
… has increased in a lot of fields– still not, probably, 50-50 in things like physics and maths– but there’s actually … It’s them that do it. They created the Wiki. They edit the pages. They add the content. They run the Twitter account. … a review paper of actinobacteria, some advances. All the authors and that are PhD students. And I think it’s a really …
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Institutional User Agreements
… the Agreement. The signing official must have the legal authority to commit your institution or organization to the … to the DOE, and publication requirements. An official with authority is usually an individual in a central office, such … constructs. The MTA requires signatures by an institution’s authorized representative, the submitting researcher, and by …
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Viral Genomics Group
… RNA virome reveals diverse clades of bacteriophages. Cell 185, 21. https://doi.org/10.1016/j.cell.2022.08.023 Roux, S., … Microbiology. 30, 11. https://doi.org/10.1016/j.tim.2022.05.003 Berg, M. et al. (2021) Host population diversity as a … with long standing virus-host interactions. ISME J. 15, 1569–1584. https://doi.org/10.1038/s41396-020-00870-1 …
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Environmental Genomics Group
… into DNA by active microbial populations (Hungate et al. 2015). With the development of high-throughput SIP (Nuccio et … Sci Data 11 , 966 (2024). https://doi.org/10.1038/s41597-024-03826-8 Nayfach, S., Roux, S., Seshadri, R. et al. A … Acids Research , Volume 51, Issue D1, 6 January 2023, Pages D723–D732, https://doi.org/10.1093/nar/gkac976 Roux, …
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Natural Prodcast Episode 14: Nigel Mouncey
… was bioengineering bio-process R&D, BBRD, a group of about 75 people. So our biggest project was the spinosyn family of … years ahead of plan with hitting our targets which was terrific. We ended up working with a contract manufacturer … 30 to September 1st. The link is found all over JGI’s web pages.  DAN: And I will put it in the show notes along with …
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