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Fungal & Algal Program
The Fungal & Algal Program explores the vast diversity of fungi and algae … This research helps translate their genomic potential into practical applications, including sustainable biofuels, …
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Fungal & Algal Program User Advisory Committee
The Fungal & Algal Program Advisory Committees is chartered by the Science …
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Natural Prodcast Episode 4: Nancy Keller
… … DAN: You’re listening to the US Department of Energy Joint … episode is our conversation with Nancy Keller, a fantastic fungal natural products researcher from the University of … I wanted to start, maybe just by asking you how did you get into the field of natural products?   NANCY: Yeah, that’s a …
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint … for every episode we put out. I actually put a lot of time into preparing those transcripts, so I hope somebody’s going … natural products of microbial origin is around 30,000 from fungal, and a 40,000 from bacteria. Okay? And among the …
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Partnerships: Myco-Ed
The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a … that consists of coordinated hands-on experiments across fungal biology teaching labs. The purpose of the program is … tissue, isolate genes and more. The metadata then goes into iNaturalist. Myco-Ed has:  ~50 lineages selected for …
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The genome of Xylona heveae provides a window into fungal endophytism.
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Plant-Microbial Interactions Group
Plants are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial … ‘omics methods. Here we were able to capture both plant and fungal expression patterns in root cross-sections. … …
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Project Management Office
The JGI Project Management Office carries out a number of activities to facilitate world-class … DNA Synthesis and Single-Cell Genomics Vivian Ng Fungal Genomics …
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Products
The JGI has diverse capabilities in: DNA and RNA sequencing, Sample … small genes assembled to less than 5kb in length, cloned into vector of choice Glycerol stock of sequence verified … to determine coverage of variants depends on project Fungal Minimal Draft Lower coverage short-read whole genome …
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Enlarging Windows into Understanding Gene Functions
JGI innovates protocol revealing how genetic variations in sequences … genomes of different species. This can provide insights into how they orchestrate sets of genes to execute similar … the JGI’s Community Science Program (CSP) focuses on a fungal comparative ENCODE project known as FUNCODE. “We …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… … DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion … And with Christian, I started getting a little bit more into fungi and learning the differences of all the genetic … Salt Lake too. So that moves across, and I’m looking at my window because if it starts snowing, I’m going to start– I …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between … found in soil samples, and assembled those RNA transcripts into a metatranscriptome. Overall, they found that despite …
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