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Project Management Office
The JGI Project Management Office carries out a number of activities to … formal User Agreement, and ultimately launching the user’s project. See below for details on each step. … Please review …
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Projects
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Frequently Asked Questions: Project Management
Eukaryotic projects: Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , or …
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Plant Program
With collaborative user projects, the JGI’s Plant Program delves into the natural … will accelerate gene discovery. BrachyPan on Phytozome (see Brachypodium Resources below) PennyPan on Phytozome …
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Natural Prodcast Episode 11: Marnix Medema
… … Dan Udwary: You’re listening to the Department of Energy … miners use, including antiSMASH, MIBiG, and newer efforts, like BiG-scape and BiG-SLiCE, and now the BiG-FAM database … of these crazy genes, some of these enormous genes that encode these very large enzymes. And I was like, OK, wow, …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… … DAN UDWARY: You’re listening to the Department of Energy … in 2020 where this is all explained in detail, so if you’d like a link, just check out the show notes above or at … to find any new genomes, new areas or regions or loci, that encode for new, truly chemical dark matter BGCs. That’s the …
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Natural Prodcast Episode 16: Marcy Balunas
… … DAN: Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it … bucket. [LAUGHS] I don’t know that that’s ever necessarily like a good description of anyone because chemistry means a … be able to find genes in the organism in its sequence that encode for that biosynthesis. But sometimes you have to know …
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Natural Prodcast Episode 5: Brad Moore
… … DAN: You’re listening to the US Department of Energy Joint … about natural products you’ll get a good sense of what it’s like working with him.  We talk about his father, the … linear, like Streptomyces , but circular. 10% of the genome encoded natural product pathways. Dan: Yeah, that’s kind of …
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How to Submit Sequencing Samples
Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI. … the process. If you have any questions, please contact your Project Manager or jgi-project_mana[email protected] . … 1) …
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Natural Prodcast Episode 8: Eric Schmidt
… … DAN: You’re listening to the US Department of Energy Joint … in the old days, saw how hard it was – it felt kind of like training for a marathon by running at a high altitude! … so I’m hoping we can follow up with him again as the project progresses! If you’re interested in RiPPs, I’ll put …
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Natural Prodcast Episode 18: A CSP Primer
… … DAN UDWARY: It’s been a while, but Natural Prodcast is back … and scientific research, especially at US National Labs, like Lawrence Berkeley Lab (that’s LBL), the National Lab … is kind of like a CSP, but you would be proposing a larger project that requires the work of two or more DOE user …
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Data Policy
Data produced and released by the US Department of Energy (DOE) … for the remainder of this policy) produced through all user projects accepted FY22 and later through the Community … for their planned work.   … For sequencing or metabolomics projects: data are subject to a  one-year embargo .  For …
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