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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … the first analysis of data produced at the facility, provided this is done in a timely fashion. The publications resulting from such efforts should specify the collaborative nature of …

… for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … talent for biosciences.  Adopt-a-Genome has: ~20 faculty from institutions across the country Efforts in ongoing …

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics … to identify new divergent lineages and expand the Tree of Life. We then investigate the coding potential to find …

… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … cycling and inter-organismal interactions. These insights are crucial for addressing key environmental … sequestration and bioeconomy applications. The program provides high-quality, large-scale genomic data to advance …

… approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … on the assembly of metagenomic sequence data into microbial genomes, which is of fundamental value to improving our …

… Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … principles that govern ecosystem processes. This research provides insights into microbial diversity and metabolic potential, … catalog of viral, microbial, and microeukaryote genomes and mobile genetic elements, linked to custom …

… collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global … to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … agricultural productivity. Research spans diverse areas — from understanding how terrestrial plants and phytoplankton …

… I got the chance to do genome mining on more than 50,000 genomes that we derived from meta-genome sequences. As always, you’ll find … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … genome mining over the years, and we talk about a new publication out of JGI in Nature Biotechnology , for which …

… conversation with Aaron Puri. He is an Assistant Professor from the Chemistry department at the University of Utah, so … And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that … quorum sensing allows you to do — generally there’s just three components in these acyl homoserine lactone based …

… Research in the Woyke laboratory focuses on the utility of … such effort is targeted at environmental cells that are from candidate phyla, major branches in the phylogenetic … in the public domain, the bulk of which belong to only three phyla. The Woyke group uses single-cell sequencing as …

… Biology is currently experiencing a revolution brought on by rapid developments in … and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … discoveries and catalyzing a major transition of biology into data science.  Research in the Kyrpides group focuses …