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Publication Policy
… The purpose of this policy is to establish communication norms around JGI contributions, … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … acknowledgment (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, …
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Institutional User Agreements
… Appendix identifies the type of work or specific proposal to be covered under the Agreement. The signing official must … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is … early will prevent disruption and delays on the work. The transfer of a proposal from one commercial institution to a …
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New Lineages of Life Group
… Our research is focused on the discovery and characterization of … bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine …
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to … metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It also enables exploration of energy … JGI scientists are able to link metabolic activity with gene expression, providing deeper insights into functional …
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Microbial Program
… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying … large-scale genomic data to advance microbial research that drives sustainable solutions in energy, agriculture and …
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Natural Prodcast Episode 23: Aaron Puri
… now I’m working on this the afternoon of the day I’m due to release it, which is not ideal for me keeping myself on … and he has a project with the JGI to synthesize the genes for and explore the chemistry of quorum sensing … AARON PURI: Yeah. Right. And that’s you’ll find me in the woods then. [LAUGHTER] JACKIE: So we’re kind of across — …
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Horizontal gene transfer and gene dosage drives adaptation to wood colonization in a tree pathogen
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Plant Program
… With collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global … understanding of plants’ biological and ecological roles to foster sustainable solutions for energy, agriculture and … to regulate Earth's carbon balance, to exploring the genetic basis of how plants have naturally adapted to varied …
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Natural Prodcast Episode 14: Nigel Mouncey
… my undergraduate in microbiology and then PhD in microbial genetics in the UK. And came across to the US for a couple … we partnered with a company in Japan, Meiji Seika Pharma, transferred the technology that they developed over to Dow … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Natural Prodcast Episode 16: Marcy Balunas
… And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … products is that we don’t know what all the biosynthetic gene clusters look like.  DAN: For sure.  MARCY: We have so … environments, where there are more bacteria there is more horizontal transfer. And so it’s beneficial then to have …
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Publications
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Secondary Metabolites Program
…   The JGI’s Secondary Metabolites Program focuses on the exploration of … for fundamental growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient … conditions, with only a small portion of the biosynthetic gene clusters (BGCs) being expressed. The program works to …
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