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Plant Program
With collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to … climate and soil conditions around the globe to identify genes to improve our domesticated species.  The program … types to explore the molecular mechanisms behind phenotypic evolution. It also utilizes advanced tools, including deep …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… paper , researchers focused on the full composition of genes, or pangenome, of the model plant  Marchantia polymorpha. Commonly known as liverwort, this was done to gain insights into gene families …
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Single Cell Research Group
… conjunction with whole genome sequencing. … Jean-Marie Volland: Assistant Professor, UC Santa Barbara Esther Singer: … Biotechnol 35(8): 725-731 (2017). Woyke T . & Rubin E.M. Evolution. Searching for new branches on the tree of life. … Z. & Rubin E.M. Metagenomic discovery of biomass-degrading genes and genomes from cow rumen. Science 331, 463-7 (2011). …
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Mission
… of our Community Science Program, characterize organisms (plants and microbes) relevant to the DOE science mission … cycles, as well as atmospheric particle formation and evolution.  Data from such studies is expected to advance a … by NOAA as the area within 185 km/100 nautical miles of land), and the subsurface. … About Us … JGI History … …
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Metabolomics Program
… metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It also enables exploration of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With advanced mass … and a list of scored metabolite matches associated with genes.  … Metabolomics Offerings & Capabilities … …
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Plant Program User Advisory Committee
The Plant Program Advisory Committee is chartered to offer … on the effective management and strategic objectives of the plant program. The committee serves as the program's key …
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Plant-Microbial Interactions Group
Plants are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … simiae WCS417. One suggested function of these phage genes is the modulation of their bacterial host to colonize …
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Natural Prodcast Episode 17: Cassandra Quave
… curator there, with a broad range of experimental work on plants for drug discovery in antibiotics, anticancer, and … history of what happened in Indonesia, in the Banda Islands, with everyone that’s enjoying their pumpkin spice … mixed powders, my immediate thought was this is going to revolutionize plant natural products work. And I’m always …
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Products
Constructs <5kb in size Single gene or multiple small genes assembled to less than 5kb in length, cloned into … Assembly, annotation ( IMG/M ), mapping 273/273 Metagenome Cell Enrichments Obtained by physical separation of a … contigs. Assembly, annotation ( IMG ) Depends on project Plant and Algal Standard Draft Whole genome shotgun …
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Insights into Land Plant Evolution Garnered from the Marchantia polymorpha Genome
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Natural Prodcast Episode 11: Marnix Medema
Marnix Medema , from Wageningen University in the Netherlands. Marnix is still pretty young, but he’s been dead … work. And that it involves some of these crazy genes, some of these enormous genes that encode these very … called “disease suppression”, where the microbiome of a plant, so the bacteria living on and inside the roots are …
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