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Fungal & Algal Program
… The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental … the biological mechanisms that enable fungi and algae to play a vital role in carbon cycling, biodegradation … ecosystems and industries. The program also explores microeukaryotic members of microbial communities, cataloging gene …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… to request the capabilities and expertise of both national user facilities in one research proposal.  Submit … The call is open to almost anyone. Citizenship/nationality or working at an institution in North Korea, … to work with single organisms and mixed cultures of fungi, algae, protists, bacteria, archaea, viruses, plants, …
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New Lineages of Life Group
… and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence … between viruses and cellular life, providing unique insights into viral evolution and complexity, and encode for … lakes and hyperthermal springs. This research provides insights into the limits of life and potential for life on …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… And then coming up after that, we’ll have a lineup of international scientists who also do genome mining. We’ve got a … going to be big pieces somewhere, right? The National Park Service has a great writeup on the kind of gold mining … of Biosynthetic Clusters , which is a subsection of the IMG data portal , which is a larger portal for microbial …
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Environmental Genomics Group
… By recovering population genomes from metagenomes, we gain insights into microbial interactions, evolution, and … identify and classify bacteria and archaea as well as gain insights into the evolutionary relationships and divergence … Profile HMM search across all IMG metagenomes, capturing sequence diversity for proteins …
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Who We Are
… of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence Berkeley National Laboratory. The JGI consists of 225 researchers and … such as the DOE Systems Biology Knowledgebase and the National Microbiome Data Collective.    … and harnessing genomic information from plants, fungi, algae, non-medical microbes, microbial communities, and …
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Frequently Asked Questions: Project Management
… Eukaryotic projects: Kerrie Barry or Vivian Ng Prokaryotic … Guidance on international shipments can be found in the Sequencing Sample … via the Genome Portal , at the following sites: Microbes: IMG (citation: https://doi.org/10.1093/nar/gkaa939 ) … Mycocosm (citation: https://doi.org/10.1093/nar/gkt1183 ) Algae: Phycocosm (citation: …
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Metagenome Program
… that govern ecosystem processes. This research provides insights into microbial diversity and metabolic potential, … based on functional traits. These advancements provide new insights into microbial ecosystems.  The Program also aims … regulation, and noncoding RNAs in microbiomes. The insights from this work have the potential to drive …
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Natural Prodcast Episode 18: A CSP Primer
… production, and scientific research, especially at US National Labs, like Lawrence Berkeley Lab (that’s LBL), the … quality that we provide. So for fungal and for a lot of our eukaryotic genomes, all our eukaryotic genomes. Fungal plant, algal genomes, a lot of effort goes into generating these …
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Natural Prodcast Episode 1: The Primer, Part 1
… of Science User Facility located at Lawrence Berkeley National Laboratory. Being a User Facility means that … pathways in a microbial cell, it looks like. It could be a eukaryotic cell, but you know, it’s like a big rectangle … of Science User Facility located at Lawrence Berkeley National Lab. You can find links to transcripts, more …
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Insights into the red algae and eukaryotic evolution from the genome of Porphyra umbilicalis (Bangiophyceae, Rhodophyta)
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Natural Prodcast Episode 3: The Primer, Part 3
… JGI in this area. If this series of podcast episodes has sparked your interest, and you want to learn more, then I … of Science User Facility located at Lawrence Berkeley National Lab. You can find links to transcripts, more …
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