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The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them translate …

… more about this work and further details on our Genomic Encyclopedia of Bacteria and Archaea . Exploration of … three domains of life. It provides tools for analyzing the functional capability of microbial communities based on …

… strains. This approach allows for the identification of key functional traits that have direct applications in bioenergy … pangenomes, and integrate multi-omics tools to enhance functional studies. These efforts seek to improve … for energy, agriculture, and the environment. … Genomic Encyclopedia of Fungi focuses on aspects of plant feedstock …

… expression hosts like maybe in many fields now like in cyanobacteria or even [ Streptomyces ] coelicolor you’ll see … thing I’m really fascinated by looking at the field of cyanobacterial chemical ecology and all of that. So again, … maybe a somewhat restricted niche there. But oftentimes cyanobacteria are wonderful natural product producers. And …

… of host-virus interactions, the exploration of the functional dark matter as well as the development of novel … of big data. … Pavlopoulos GA et al. (2023) Unraveling the functional dark matter through global metagenomics. Nature . … Acids Res. 43(14):6761-71 Kyrpides NC et al. (2014) Genomic Encyclopedia of Bacteria and Archaea: Sequencing a Myriad of …

… as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating … Large-Scale LOI #2 … CSP New Investigator Submission … CSP Functional Genomics Submission … FICUS Example #1 … FICUS …

… solutions.  The program has been a pioneering effort in functional genomics since 2012, with a focus on addressing … The DNA Synthesis Program plays a central role in advancing functional genomics, focusing on developing genetic systems … supports researchers exploring how to convert sequence into functional assessments. The team has a research & …

… we were working with tunicates, and tunicates living with cyanobacteria, and various other types of bacteria. So I got … living with lots of bacteria, but especially with these cyanobacteria that were photosynthetic. So we wanted to know if the cyanobacteria were involved in making compounds, and how …

… the quality of single-cell genomes and directly link functional information with individual cells. Research Team  … measure environmental microbiome activity levels.This functional assay lets us move beyond cataloging the genes of … of metabolic activity (BONCAT+FACS). To provide additional functional insights into microbial genomes, the JGI now uses …

… in the marine ecosystems and marine actinomycetes and cyanobacteria. And we thought we could also– let’s see what … for their substrates, that you couldn’t buy– there wasn’t a encyclopedia of enzymes at Aldridge that I could use to buy … ATP synthase.” On everninomicin biosynthesis: “EvdS6 is a bifunctional decarboxylase from the everninomicin gene …

… later. And she happened to work with nature products from cyanobacteria. So that’s how I started. I love the lab, I … time, the microviridins. These are cyclic peptides from cyanobacteria. They have a tricyclic structure that’s really …

… article adds to the compendium generated as part of Genomic Encyclopedia of Bacteria and Archaea (GEBA) initiative. …