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Natural Prodcast Episode 14: Nigel Mouncey
… that the JGI’s Annual User Meeting is coming up, August 30th through September 1st. Three days of great science, and … available, but no worries, she’ll back next time! We’ve already got lots of great talks recorded and on the way – I’m … community. A few examples of those are obviously expanding the diversity of known secondary metabolites and …
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Microbiome Data Science Team
… global diversity of alternative genetic codes (Science 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science 2017, Nature Microbiology 2018), discovery of new genes with … the sequencing and comparative analysis of thousands of archaeal and bacterial type strains ( GEBA-type strains …
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Natural Prodcast Episode 12: Nadine Ziemert
… of secondary metabolism. Welcome back. This will be episode 12 of Natural Prodcast. And it’s our conversation with … around because it’s too late. They should be asleep already. But we’re not just here to talk about us. We have a … all these 120 genomes, and each of them have– I don’t know– 30 gene clusters or so. So I think I spent two years only …
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Single Cell Research Group
… the gap between cultivated and uncultivated Bacteria and Archaea has steadily been widening since 2005. This gap is … single-cell sequencing. Nat Methods 14(11): 1045-1054 (2017). Schulz F., Yutin N., Ivanova N. N., Ortega D. R., Lee … P., Kyrpides N. C. 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life.” Nat …
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DOE Metrics
…   700.0 1,144.186 163% 8,585 8,640 100.6% Q1 2025 175 190.304 109% 2,164 2,136 98.7% Q2 2025 175 152.100 87% 2,117 2,112 … target is based on 98% of the total available hours.   FY 2017 DOE Metrics 1,598 unique* JGI users in FY2017 …
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Natural Prodcast Episode 23: Aaron Puri
… that grow on one-carbon compounds like methanol and methane. And I really dove into microbial physiology and … nice summer day in Seattle I think this was like 2013 or 2014. And antiSMASH — I know you’ve interviewed Marnix … access to the whole sigma catalog of precursors in their 12C form. You can feed those and look for incorporation in …
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University of California, Merced Internship Program
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The Expanding Universe of Methane Metabolisms in Archaea
… Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. Methane is a greenhouse gas 20 times more potent than carbon … of anaerobic environments suggest the diversity of methane metabolisms is “vastly underestimated.” In the March 4, …
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Alabama Agricultural & Mechanical University Internship Program
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Viral Genomics Group
… of hypermutation in the global microbiome. Nat Commun 12, 3076. https://doi.org/10.1038/s41467-021-23402-7 Roux, S. and Emerson, J. (2022) Diversity … Cryptic inoviruses revealed as pervasive in bacteria and archaea across Earth’s biomes. Nature Microbiology. 4, …
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Microbial Program
… vast and diverse world of microbes. Studying bacteria and archaea, including those associated with microeukaryotes, … microbial diversity — with an emphasis on bacteria and archaea, and including those associated with … lineages that are important for bioeconomy applications. By expanding our knowledge of microbial functions and …
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Secondary Metabolites Program
… biochemical diversity within secondary metabolites, expanding their potential applications in the bioeconomy … function of these biologically significant compounds. By expanding the repertoire of secondary metabolites and …
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