Search

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics … and complexity, and encode for a treasure trove full of novel genes ready to be tapped for downstream applications. …

… however they do so under strong constraints exerted by viruses. Research in the viral genomics group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … is active when/where, and how? ). The JGI Viral Genomics group attempts to address this question in natural soil …

… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of interest. One such effort is … the bulk of which belong to only three phyla. The Woyke group uses single-cell sequencing as a means to begin …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic … develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic … monitoring, bioremediation, and the discovery of novel enzymes and bioactive compounds. …

… genomics and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … of biology into data science.  Research in the Kyrpides group focuses on Microbiome Data Science and analysis of Big … of the functional dark matter as well as the development of novel methods to enable large-scale comparative analysis, …

… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … symbionts, detrimental microbial pathogens, and associated viruses that all contribute to a dynamic ecosystem. We are interested in how plants self-organize, influence, …

… The Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also seeks out new approaches that utilize microfluidics/microdroplet … The JGI uniquely offers the first quantitative Stable Isotope Probing (SIP) …

… Software engineers in the Synthetic Biology Informatics Group develop, deploy, and maintain software that support the JGI’s Synthetic Biology Program .  … For further details, please reach out to the Group Lead …

… Our lab is using mass spectrometry based metabolite profiling to provide direct biochemical datasets to improve our understanding of microbial metabolism. Of particular interest is understanding the distributed and dynamic metabolite networks of environmental microbes and how they transform their …

… The User Support Analysis group provides computational analysis for new technology development and JGI user science projects. We … epigenomics. Our work varies in scope from the development of highly customized analysis workflows for new product …

… and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … associated with microeukaryotes, enhances our understanding of terrestrial biogeochemical cycling and inter-organismal … in particular to study inter-organismal interactions. Novel approaches are being explored to predict microbial …

… cycling and bioproduct applications.  The team has three subgroups: Synthetic Biology Lab : a user science group … develops data science tools for workflow management and novel automations for DNA design, assembly and analysis Overview of synthesis products The JGI DNA Synthesis platform enables …