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… me say that the Joint Genome Institute is a “Department of Energy user science facility”, and so today what you’re … going to talk about JGI’s Community Science Program , or CSP, which is the main mechanism by which users work with … metagenome, metatranscriptomes for SNP analysis if somebody has a resequencing project. For example, people do …

… new capabilities and resources to users through a BER data ecosystem.  A data ecosystem is a connected resource where data from different … NMDC, EMSL and the Protein Data Bank enables predictive ecosystem biology. The collaborations present exciting … NERSC and the DOE Energy Sciences Network (ESNet), the JGI has unique access to both expertise and infrastructure to …

… The CSP New Investigator Call is for investigators and research … PIs cannot have been lead PI on any previously accepted JGI CSP or FICUS proposal.   Competitive projects will provide … will be provided for free to the PI by the Department of Energy’s funding of the JGI. There is no cost to the user …

… The CSP Functional Genomics call is to enable users to perform … genomic information into biological function.  The emphasis is on projects leveraging JGI’s DNA synthesis and … will be provided for free to the PI by the Department of Energy’s funding of the JGI. There is no cost to the user …

… be given to projects that address the areas of special emphasis that are listed in the call and leverage the diversity … will be provided for free to the PI by the Department of Energy’s funding of the JGI. There is no cost to the user … For the CSP Large Scale call, a Letter of Intent (LOI) is required …

… to a better understanding of microbial communities and ecosystem function.  The Environmental Genomics group also … In an effort to gain better understanding of complex ecosystems within hard to sequence and assemble samples, … of Earth’s microbiomes. Nat Biotechnol 39 , 499–509 (2021). https://doi.org/10.1038/s41587-020-0718-6 I-Min A …

… Microbes drive critical ecosystem functions and affect global nutrient cycling, … host cell take-over by viruses, and attempts to evaluate ecosystem-level impacts of viral infections. The Viral … group attempts to address this question in natural soil ecosystems by combining metagenomics with other omics …

… experimental approaches to assess microbial activity across ecosystems.  By studying microbial communities and their … aims to unlock the fundamental principles that govern ecosystem processes. This research provides insights into … diversity and metabolic potential, with implications for energy production, environmental sustainability, and many …

… target is based on 98% of the total available hours.   FY 2021 DOE Metrics There were 2,180 unique* JGI users in FY2021 , which includes Principal Investigators (PIs), Co-PIs, … Goal   Goal (hours)**   Actual Total   Actual % Goal   FY 2021 Total   250.0 467.195 187% 8,760 8,568 99.8% Q1 2021 …

… Institute. And so anybody who’s listened to other episodes has heard me talk about JGI and what we do. And Nigel is, … because well, it affects my job. But also I think JGI has got a lot of directions that we could go and ways that … big things for me has been working in the Department of Energy. I really wasn’t known to them and they weren’t known …

… JGI’s portfolio of user companies. Now the Department of Energy is uniting National Labs and industry, including User … discovery, strengthen national security and ensure U.S. energy dominance by integrating supercomputers, datasets and … data applications. As a large-scale data generator, the JGI has a key role to play in providing high-quality, structured …

… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the … FY22 and later through the Community Science Program (CSP), Facilities Integrating Collaborations for User Science … and Environmental Research Support Science (BERSS), or Bioenergy Research Centers (BRCs). Overview …