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… bioprospecting vs biopiracy, early stage drug discovery in general, and a possible data-driven future for plant natural … culture-disconnected. Like we’ll take some soil samples and sequence all the bugs out of that or whatever. And so I was … and not necessarily in medicines. [CHUCKLES] Selfishly, what can or should we be doing to help the plant …

When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for all constructs should be emailed to  … written by M. Wayne Davis or commercial options include SnapGene . … How To Use ApE To save your ApE file as a Genbank …

… is also reflected in the strongly biased representation of sequenced genomes in the public domain, the bulk of which … I.L., Woyke T ., Auchtung T.A., Dilly G.F., Dutton R.J., Fisher M.C., Fontanez K.M., Lau E., Stewart F.J., Richardson … insights through metagenomic analysis of a microbial consortium. Nature 443, 950-5 (2006). … Research Interests … …

… the JGI’s Plant Program delves into the natural world’s potential to address global challenges by exploring plants’ … to regulate Earth's carbon balance, to exploring the genetic basis of how plants have naturally adapted to varied … manipulation in the laboratory. Both germplasm (sequenced mutants and natural accessions) and protocols …

… edge molecular capabilities and state-of-the-art next-generation sequencing to enable biological discovery by the …

… energy and ecosystem management. The program aims to generate high-quality genomic datasets, particularly for … resequencing, RNA sequencing and epigenomics. Expansion of sequence space:  The JGI generates reference genomes from … rich data such as inferred host taxonomy, conjugation potential, antibiotic resistance genes, and ecosystem …

… sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is … percentile*) DNA Synthesis Constructs <5kb in size Single gene or multiple small genes assembled to less than 5kb in length, cloned into vector of choice Glycerol stock of sequence verified clone 102/NA DNA Synthesis Constructs …

… the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and … on large-scale sequencing efforts that survey the vast phylogenetic and ecological diversity of fungi and algae, … The  1000 Fungal Genomes Project is a five-year project to sequence 1000 fungal genomes from across the Fungal Tree of …

… as part of the International Biodiversity Drug Discovery consortium doing natural products isolation/structure … and to go through all of these abstracts and titles and to fish out data about new molecules that have been found. And … And that’s been followed by developments in pulse sequences and improvements in the ways in which you acquire …

… along with their associated viruses and mobile genetic elements. Beyond exploring and characterizing … provides insights into microbial diversity and metabolic potential, with implications for energy production, … comprising the largest public collection of plasmid sequences identified from genomes, SAGs, MAGs, metagenomes …

… diversity within secondary metabolites, expanding their potential applications in the bioeconomy including biofuels, … conditions, with only a small portion of the biosynthetic gene clusters (BGCs) being expressed. The program works to … computational analyses of BGC size and complexity, BGC sequence composition, metabolic similarity & compatibility, …

… metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It also enables exploration of energy … JGI scientists are able to link metabolic activity with gene expression, providing deeper insights into functional … a web-based service returns a list of scored reaction and gene matches associated with metabolites and a list of …