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The Synthetic Biology lab is divided into a DNA synthesis production group and a synthetic biology applications group. The DNA synthesis and assembly … technologies including PacBio and Illumina.  The synthetic biology user science group: The applications group is focus …

Software engineers in the Synthetic Biology Informatics Group develop, deploy, and maintain software that support the JGI’s Synthetic Biology Program .  Representative software includes: … tools, which track samples through the JGI’s Synthetic Biology pipeline as well as provide process automation …

Database provides details on river microbes in 90% of US continental watersheds. The … to the community level. The Impact Rivers are transport systems, and their health is heavily reliant on the energy … to study river microbiomes. To understand the microbiology of watershed systems, they utilized over 160 river …

… collaboration with partner organizations such as the DOE Systems Biology Knowledgebase and the National Microbiome Data …

… applications.  The team has three subgroups: Synthetic Biology Lab : a user science group dedicated to user project … engineering — to make them more user accessible Synthetic Biology Informatics Group : a team that develops data … Lead … More Resources … Software Engineers in the Synthetic Biology Informatics Group develop, deploy, and maintain …

… environments. … KBase is a critical partner in enabling systems biology analyses, such as metabolic modeling, that go well … from single genes and individual genomes to metagenomes to systems-level modeling and understanding. JGI and KBase are …

… in studies of complex biological and environmental systems. We optimize our service to the community through … metabolomics and computational analysis that enable systems-based scientific approaches to these challenges.     … (IGB), a home it shares with the staff of the DOE Systems Biology Knowledgebase (KBase) and the National Microbiome …

… to Roger Linington, from Simon Fraser University in British Columbia, Canada. This is the last of the podcasts we … my hotel room at SIMB, or the Society for Industrial Microbiology conference that took place in January this year in … has gone on, the more we’ve become interested in sort of systems level approaches. So rather than asking one question …

… challenges. Through innovative research in synthetic biology, the program enables the design and synthesis of complex genetic pathways and biosystems. It The program fosters collaboration with U.S. and … functional genomics, focusing on developing genetic systems that can address global energy and environmental …

… works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular level. Integrating genomics with … understanding the critical roles of metabolites in living systems, particularly as they relate to DOE missions in the …

… performance computing (HPC) and data analysis.  The DOE Systems Biology Knowledgebase ( KBase ) integrates systems biology data and tools to help predict biological …