DOE Joint Genome Institute

COVID-19
About Us
Contact Us

Our Science
Streamlining Regulon Identification in Bacteria
Regulons are a group of genes that can be turned on or off by the same regulatory protein. RIViT-seq technology could speed up associating transcription factors with their target genes.
More
Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
In a special issue of the journal Synthetic Biology, JGI scientific users share how they’ve worked with the JGI DNA Synthesis Science Program and what they’ve discovered through their collaborations.
More
A Natural Mechanism Can Turbocharge Viral Evolution
A team has discovered that diversity generating retroelements (DGRs) are not only widespread, but also surprisingly active. In viruses, DGRs appear to generate diversity quickly, allowing these viruses to target new microbial prey.
More
Our Projects
Polar Phytoplankton Need Zinc to Cope with the Cold
As part of a long-term collaboration with the JGI Algal Program, researchers studying function and activity of phytoplankton genes in polar waters have found that these algae rely on dissolved zinc to photosynthesize.
More
When “The Blob” Made It Hotter Under the Water
Researchers tracked the impact of a large-scale heatwave event in the ocean known as “The Blob” as part of an approved proposal through the Community Science Program.
More
Genome Insider podcast: THE Bioenergy Tree
The US Department of Energy’s favorite tree is poplar. In this episode, hear from ORNL scientists who have uncovered remarkable genetic secrets that bring us closer to making poplar an economical and sustainable source of energy and materials.
More
Data & Tools
- IMG
- Data Portal
- MycoCosm
- PhycoCosm
- Phytozome
- GOLD
JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
The HPCwire Editors Choice Award for Best Use of HPC in Life Sciences went to the Berkeley Lab team comprised of JGI and ExaBiome Project team, supported by the DOE Exascale Computing Project for MetaHipMer, an end-to-end genome assembler that supports “an unprecedented assembly of environmental microbiomes.”
More
A User-Centered Approach to Accessing JGI Data
Reflecting a structural shift in data access, the JGI Data Portal offers a way for users to more easily access public data sets through a common set of metadata.
More
A More Intuitive Phytozome Interface
Phytozome v13 now hosts upwards of 250 plant genomes and provides users with the genome browsers, gene pages, search, BLAST and BioMart data warehouse interfaces they have come to rely on, with a more intuitive interface.
More
User Programs
Digging into Microbial Ecosystems Deep Underground
JGI users and microbiome researchers at Colorado State University have many questions about the microbial communities deep underground, including the role viral infection may play in other natural ecosystems.
Read more
Boosting Small Molecule Production in Super “Soup”
Researchers supported through the Emerging Technologies Opportunity Program describe a two-pronged approach that starts with engineered yeast cells but then moves out of the cell structure into a cell-free system.
More
A Powerful Technique to Study Microbes, Now Easier
In JGI's Genome Insider podcast: LLNL biologist Jennifer Pett-Ridge collaborated with JGI scientists through the Emerging Technologies Opportunity Program to semi-automate experiments that measure microbial activity in soil.
More
News & Publications
- News
- Blog
- Podcasts
- Webinars
- Publications
- Newsletter
- Logos and Templates
- Photos
Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
Harnessing JGI and Berkeley Lab resources, researchers characterized a giant - 5,000 times bigger than most bacteria - filamentous bacterium discovered in the Caribbean mangroves.
More
Monitoring Inter-Organism Interactions Within Ecosystems
Many of the proposals approved through JGI's annual Community Science Program call focus on harnessing genomics to developing sustainable resources for biofuels and bioproducts.
More
Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
As warm-adapted microbes edge polewards, they’d oust resident tiny algae. It's a trend that threatens to destabilize the delicate marine food web and change the oceans as we know them.
More

All JGI Features

January 7, 2015

CAMI logo

Logo of CAMI (Critical Assessment of Metagenome Interpretation)

More topics:

COVID-19 Status
News
Science Highlights
Blog
Webinars
CSP Plans
Featured Profiles

Related Content:

Genome Insider S3 Episode 2: Better Crops With a Pointillist Approach to Plant Genomics

Extracting the Secrets of Secondary Metabolites

Upcoming Deadline for the CSP New Investigator Call

Genome Insider S3 Episode 1: Chomping Toward Better Plastic Recycling

Streamlining Regulon Identification in Bacteria

Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts

Careers
Contact Us
Events
User Meeting
MGM Workshops
Internal

Disclaimer
Credits
Policies
Emergency Info
Accessibility / Section 508 Statement

JGI is a DOE Office of Science User Facility managed by Lawrence Berkeley National Laboratory

© 1997-2022 The Regents of the University of California