Genome sequence of the soil bacterium Saccharomonospora azurea type strain (NA-128(T))

Published in:

Stand Genomic Sci 6(2) , 220-9 (May 25 2012)

Author(s):

Klenk, H. P., Held, B., Lucas, S., Lapidus, A., Copeland, A., Hammon, N., Pitluck, S., Goodwin, L. A., Han, C., Tapia, R., Brambilla, E. M., Potter, G., Land, M., Ivanova, N., Rohde, M., Goker, M., Detter, J. C., Kyrpides, N. C., Woyke, T.

DOI:

10.4056/sigs.2635833

Abstract:

Saccharomonospora azurea Runmao et al. 1987 is a member of the genus Saccharomonospora, which is in the family Pseudonocardiaceae and thus far poorly characterized genomically. Members of the genus Saccharomonospora are of interest because they originate from diverse habitats, such as leaf litter, manure, compost, the surface of peat, and moist and over-heated grain, and may play a role in the primary degradation of plant material by attacking hemicellulose. Next to S. viridis, S. azurea is only the second member in the genus Saccharomonospora for which a completely sequenced type strain genome will be published. Here we describe the features of this organism, together with the complete genome sequence with project status ‘Improved high quality draft’, and the annotation. The 4,763,832 bp long chromosome with its 4,472 protein-coding and 58 RNA genes was sequenced as part of the DOE funded Community Sequencing Program (CSP) 2010 at the Joint Genome Institute (JGI).

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