Complete genome sequence of Haloterrigena turkmenica type strain (4k)

Published in:

Stand Genomic Sci 2(1) , 107-16 ( 2010)

Author(s):

Saunders, E., Tindall, B. J., Fahnrich, R., Lapidus, A., Copeland, A., Del Rio, T. G., Lucas, S., Chen, F., Tice, H., Cheng, J. F., Han, C., Detter, J. C., Bruce, D., Goodwin, L., Chain, P., Pitluck, S., Pati, A., Ivanova, N., Mavromatis, K., Chen, A., Palaniappan, K., Land, M., Hauser, L., Chang, Y. J., Jeffries, C. D., Brettin, T., Rohde, M., Goker, M., Bristow, J., Eisen, J. A., Markowitz, V., Hugenholtz, P., Klenk, H. P., Kyrpides, N. C.

DOI:

10.4056/sigs.681272

Abstract:

Haloterrigena turkmenica (Zvyagintseva and Tarasov 1987) Ventosa et al. 1999, comb. nov. is the type species of the genus Haloterrigena in the euryarchaeal family Halobacteriaceae. It is of phylogenetic interest because of the yet unclear position of the genera Haloterrigena and Natrinema within the Halobacteriaceae, which created some taxonomic problems historically. H. turkmenica, was isolated from sulfate saline soil in Turkmenistan, is a relatively fast growing, chemoorganotrophic, carotenoid-containing, extreme halophile, requiring at least 2 M NaCl for growth. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of the genus Haloterrigena, but the eighth genome sequence from a member of the family Halobacteriaceae. The 5,440,782 bp genome (including six plasmids) with its 5,287 protein-coding and 63 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

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