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The IMG group owns and maintains integral components of JGI’s … (Alignment fraction, AF) have been computed for nearly 28,000 bacterial and archaeal genomes. By clustering genomes … Group supports our Microbial as well as Metagenome Science Programs …

With collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address … Flagship Genomes are selected through discussion with the JGI Plant Genome Advisory Committee and DOE, designating a …

The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation … and epigenomics. Expansion of sequence space:  The JGI generates reference genomes from diverse bacterial and … directly isolated from environmental samples.  … The IMG/M system serves as a community resource for comparative …

The JGI’s Metabolomics Program works to uncover the roles of small molecules in … of experimental workflows and computational analysis, JGI scientists are able to link metabolic activity with gene … but highly recommend using the workflow in  GNPS2 .   … In support of user science, the JGI Metabolomics …

The Fungal & Algal Program explores the vast diversity of fungi and algae to … an international research team in collaboration with the JGI. Conserved Fungal Genes of Unknown Function offer a … algal genomes and genome annotations generated by the JGI and by others. The web portal allows users to navigate …

The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene … has been a pioneering effort in functional genomics since 2012, with a focus on addressing critical energy and … in synthetic biology engineering workflows. … The IMG/M system serves as a community resource for comparative …

The Metagenome Program uses advanced sequencing technologies to decode the … computational tools for analyzing viral fragments via IMG/VR and methods to capture  environmental viral populations. Enabling microbiome data science:  The JGI supports microbiome data science by enabling comparative …

…   The JGI’s Secondary Metabolites Program focuses on the exploration of secondary metabolites … of cell-free based expression platforms: Only 10-20% of BGCs are expressed under standard laboratory … to all sequence and annotation data and their comments. … JGI researcher Dan Udwary hosts this “fireside chat”-style …

… a downloadable pdf of products categorized by Science Program.  … The majority of JGI projects come from the user community. Find out about … proposal may begin.  You will be notified by your project manager in the initial correspondence with you if the User …

Overview The JGI provides sequencing, synthesis, and targeted … and the  Office of Science Early Career Research Program .   If “BERSS” is not mentioned in the BER funding … the minimum is 100 kb, and for metabolomics, at least 22 samples are required. If your proposed request falls …

The JGI Project Management Office carries out a number of … PMO Team         Christa Pennacchio PMO Lead, Metabolomics Program Kerrie Barry Plant and Algal Genomics Natasha Brown Supply Chain Manager Tijana Glavina del Rio Metagenomics         Danielle …

The JGI’s Science Programs offer support to users and their research efforts.  JGI scientists lend their expertise to enhance the … mission. Prospective users are encouraged to reach out to program heads with questions on opportunities to partner …