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…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust … through end-to-end automation — and further advancing sequence applications, single cell genomics, biodesign, and … [QA/QC]), large-scale liquid handling automation, and sequence analysis. …

… And a lot of us moved on to work in simpler systems, like bacteria, where we figure we can make more progress faster, … you maybe explain what’s going on with their biology and why they’re so important to natural products? ERIC:  Sure. … turns a peptide, for example, from a disordered sequence into an antibiotic that kills bacteria through a …

… When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for all constructs should be emailed to  … several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank files. ApE is an …

… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis … to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those associated with … large-scale genomic data to advance microbial research that drives sustainable solutions in energy, …

… more than 50,000 genomes that we derived from meta-genome sequences. As always, you’ll find transcripts and show notes … find, things that are of interest. And usually, in terms of bacteria and secondary metabolism, those things that we want … for us– what organisms people use for genome mining, why it’s called genome mining, how the biosynthetic gene …

… Microbial communities living near hydrothermal deep-sea vents hold vast potential for bioenergy.   The … and repair themselves or eliminate waste. The Impact The bacteria, archaea and other microorganisms of the microbial … and DBI-2047598 to K.A. We thank the Department of Energy Joint Genome Institute (Community Science Program award 339, …

… learned a lot so much history from this conversation about why the ocean was basically unexplored until the 70s, and … into the secondary metabolism of some more novel marine bacteria. You know, I first met Bill as a postdoc working … forward to seeing the data when it finally gets off the sequencers. The pandemic has obviously slowed JGI down a …

… biology classes in undergrad, but my PhD was an actinobacteria. And I tell all my students this now, but when I … Duncan: Yeah. I love actinomycetes. Dan Udwary: Tell us why. I mean, I know, but I think– Alison Takemura: I want to … of almost finished characterizing them. We’ve got genome sequences, which are just incredible. We’ve looked at the …

… there are any kind of dated references to the news, that’s why. But it was a really fun conversation. And I think … they spread, why do they spread in a certain way from one bacteria to another, how do they change then, and why are … it would work, but we actually found fosmids. And we sequenced the whole fosmid at the time with Sanger …

… are hotspots on the ocean floor — underwater volcanoes and hydrothermal vents — where lively microbial communities … thrive, and even support entire ecosystems. Hear from researchers Anna-Louise Reysenbach, Emily St. John, Gilberto Flores, and Peter Girguis about sampling these communities, and understanding how they’ve adapted …

… the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing sample-level reports and tracking … 1) Review JGI sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been …

… the paradigm of how to discover natural products. So, why I’m very excited to be working with Dan, you, with the … develop enabling technologies. ie how to translate the ATGC sequence into discrete small molecules. So, Dan, I’m very … origin is around 30,000 from fungal, and a 40,000 from bacteria. Okay? And among the 40,000 from bacteria, there’s …