Search

… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our … the program supports foundational research related to soil nutrient cycling and health, terrestrial biogeochemical …

… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … artificial Intelligent/machine learning approaches in data analysis and interpretation is creating new opportunities … data science.  Research in the Kyrpides group focuses on Microbiome Data Science and analysis of Big Data. The …

… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … and are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, … fungi, viruses. Resident viruses can be found in a myriad of bacterial strains, whereby they can modulate host …

… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … approaches to assess microbial activity across ecosystems.  By studying microbial communities and their interactions, the Program aims to unlock the fundamental …

… focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … addressing key environmental challenges, such as improving soil health, carbon sequestration and bioeconomy …

… develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct … and viral diversity, leading to a better understanding of microbial communities and ecosystem function.  The … Our research focuses on the assembly of metagenomic sequence data into microbial genomes, which …

…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national … collaboration with partner organizations such as the DOE Systems Biology Knowledgebase and the National Microbiome Data Collective.    … organisms. We provide access to large-scale datasets and analysis tools for genomes, metagenomes, and metabolomics …

… The JGI is leveraging its current partnerships to offer new capabilities and resources to users through a BER … is discoverable and accessible. Linking the resources of powerful institutions like the JGI, KBase, NCBI, NMDC, … and other tools. By bringing users together through our systems, we build far-reaching communities of researchers to …

… group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … involves both experimental and computational exploration of uncultivated viral diversity, characterization of molecular mechanisms involved in virus:host interaction …

… functional genome annotation, improves understanding of the role small molecules play in diverse biological systems, sheds light on nutrient cycling, and leads to the … based methods in combination with advanced computational analysis.   Overview of metabolomics products At JGI, …

… The User Support Analysis group provides computational analysis for new technology development and JGI user science … epigenomics. Our work varies in scope from the development of highly customized analysis workflows for new product …

… One of the JGI’s key assets is our user community, comprising a broad range of researchers and trainees who use JGI resources and … high-quality outputs, such as data, publications and software. The JGI supports the entire data life cycle, and …