Community Sequencing Program
Sequencing Plans for 2008
For status information, see the Genome Projects section.
| Organism | Proposer | Affiliation |
|---|---|---|
| Large Eukaryotes | ||
| Eucalyptus tree Why? |
Myburg | Univ. of Pretoria |
| Foxtail millet (Setaria italica) Why? |
Bennetzen | Univ. of Georgia |
| Porphyra purpurea (a marine red alga) Why? |
Brawley | Univ. of Maine |
| Small Eukaryotes | ||
| Agaricus bisporus (a leaf-litter degrading homobasidiomycete ) Why? |
Challen | Univ. of Warwick |
| Heterodera glycines (Soybean Cyst Nematode) Why? |
Lambert | Univ. of illinois at Urbana-Champaign |
| Marchantia polymorpha Why? |
Bowman | Monash Univ. and Univ. of California Davis |
| Paxillus involutus (an ectomycorrhizal fungus) Why? |
Tunlid | Lund Univ. |
| Phaeocystis antarctica: A dominant phytoplankter and ice alga in the Southern Ocean Why? |
Berg | Stanford Univ. |
| Phaeocystis globosa Why? |
Allen | The Inst. for Genomic Research |
| ESTs for Pines and Other Conifers Why? |
Dean | Univ. of Georgia |
| Tetrahymena thermophila strain SB210 Why? |
Collins | Univ. of California Berkeley |
| Metagenomes | ||
| Type I Accumulibacter Why? |
McMahon | Univ. of Wisconsin-Madison |
| Anammox bacteria (Scalindua marina, Brocadia fulgida, and Anammoxglobus propionicus) Why? |
Jetten | Radboud Univ. |
| A biogas-producing microbial community Why? |
Wu | Univ. of California Davis |
| Extreme microbial habitats across the Yellowstone geothermal ecosystem Why? |
Inskeep | Montana State Univ. |
| Isolates | ||
| Allochromatium vinosum DSM 180(T) Why? |
Dahl | Univ. of Bonn |
| Uncultivated methane-oxidizing archaeon ANME-1 Why? |
Hallam | Univ. of British Columbia |
| Budding and non-budding stalked bacteria from aquatic environments (Asticcacaulis biprosthecum, Asticcacaulis excentricus, Brevundimonas subvibrioides, Herschia baltica, Hyphomicrobium denitrificans, and Rhodomicrobium vannielii) Why? |
Brun | Indiana Univ. |
| Diaphorobacter sp. strain TPSY, Ferrutens nitratireducens strain 2002, and Azospira suillum strain PS Why? |
Coates | Univ. of California Berkeley |
| Frankia strains (EuI1c, BCU110501, R43, BMG5.12, and AmMr) Why? |
Tisa | Univ. of New Hampshire |
| Haloalkaliphilic sulfate-, thiosulfate- and sulfur-reducing bacteria (Desulfonatronovirga dismutans ASO3-1, Desulfovibrio alkaliphilus AHT2, and Dethiobacter alkaliphilus AHT1) Why? |
Muyzer | Delft Univ. of Technology |
| Halothiobacillus neapolitanus and Thiomonas intermedia Why? |
Heinhorst | Univ. of Southern Mississippi |
| Thermophilic or hyperthermophilic methanoarchaea within the Methanococcales (Methanothermococcus okinawensis IH1, Methanotorris igneus Kol 5, Methanotorris formicicus Mc-S-70, Methanocaldococcus fervens AG86, Methanocaldococcus infernus ME, Methanocaldococcus vulcanius M7, and Methanocaldococcus strain FS406-22) Why? |
Whitman | Univ. of Georgia |
| Type I and Type II methanotrophic bacteria (Methylomicrobium album BG8 and Methylosinus trichosporium OB3b) Why? |
Stein | Univ. of California Riverside |
| Two Micromonosporas (aurantiaca and L5) Why? |
Hirsch | Univ. of California Los Angeles |
| Natrialba magadii ATCC 43099 Why? |
Maupin-Furlow | Univ. of Florida |
| Pseudonocardia dioxanivorans CB1190 Why? |
Mahendra | Univ. of California Berkeley |
| Selenospirillum indicus Why? |
Bini | Rutgers Univ. |
| Starkeya novella Why? |
Kappler | Univ. of Queensland |
| Thermovibrio ammonificans DSM 15698 Why? |
Vetriani | Rutgers Univ. |
| Variovorax paradoxus strains (S110 and EPS) Why? |
Han | Rensselaer Polytechnic Inst. |
| Zymomonas mobilis strains: Zymomonas mobilis strains: subsp. mobilis ATCC 10988, ATCC 29191, ATCC 31821 (ZM4), CP4; subsp. pomaceae ATCC 29192; sp. NCIB 11163 Why? |
Pappas | Univ. of Athens |
