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Partnerships: Adopt-A-Genome
… that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … with some of the latest developments in microbial genomics, metagenomics, and computational biology, and to empower them … and skills necessary to extract meaningful biological insights from sequence data, employing IMG data and tools …
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New Lineages of Life Group
… Our research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and … between viruses and cellular life, providing unique insights into viral evolution and complexity, and encode for …
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Environmental Genomics Group
… in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic … and viruses. We develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … By recovering population genomes from metagenomes, we gain insights into microbial interactions, evolution, and …
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Microbial Program
… focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … cycling and inter-organismal interactions. These insights are crucial for addressing key environmental …
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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … that govern ecosystem processes. This research provides insights into microbial diversity and metabolic potential, … based on functional traits. These advancements provide new insights into microbial ecosystems.  The Program also aims …
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Publication Policy
… The purpose of this policy is to establish communication norms around … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … synthesized, and any other contributions, such as assembly, analysis, annotation, verification, creation of genome …
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Single Cell Research Group
… Research in the Woyke laboratory focuses on the utility of … in 1985, which highlights our skewed understanding of microbial metabolism towards a minority of cultivated … means to begin filling this gap. A primary goal is to get  insights into the coding potential of candidate phyla  to …
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Microbiome Data Science Team
… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … artificial Intelligent/machine learning approaches in data analysis and interpretation is creating new opportunities for breakthrough discoveries and catalyzing a major transition of …
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Industry Engagement Program
… joined the JGI in 2017, he brought with him 20 years of industry experience — and an opportunity to expand the … Labs and industry, including User Facilities like the JGI, through its Genesis Mission. Launched in 2025, the … and environmental samples by using advanced computer analysis coupled with liquid chromatography mass …
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Publications
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Data Policy
… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to … data. The JGI Data Policy applies to research data and analysis products (referred to as “data” for the remainder of this policy) produced through all user projects accepted FY22 and later through …
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small … microbes, and understanding microbiome interactions. The  insights derived are crucial for advancing the bioeconomy, … cutting-edge metabolomics with genomic data to gain insights into how small molecules function within plants, …
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