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… technologies.  The exponential growth of DNA sequencing data, coupled with recent computational technology advances … and catalyzing a major transition of biology into data science.  Research in the Kyrpides group focuses on Microbiome Data Science and analysis of Big Data. The …

… published. The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … Feel free to reach out to your Project Manager or JGI Science Program lead(s) to discuss authorship at any point. …

… Data produced and released by the US Department of Energy … (JGI) are subject to the following Data Policy. It is our mission to support open data and information sharing. We … user projects accepted FY22 and later through the Community Science Program (CSP), Facilities Integrating Collaborations …

… its current partnerships to offer new capabilities and resources to users through a BER data ecosystem.  A data ecosystem is a connected resource … granting access to diverse datasets that deepen our understanding of how organisms interact with each other and …

… Our research is focused on the discovery and … eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, … coding potential to find novel functions that may impact microbiome structure and biogeochemical cycles. Research …

… genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses … sustainability, and many other applications. By understanding how microbes contribute to ecosystem … the Program helps drive innovations that could advance our understanding of Earth’s ecosystems. …

… including those associated with microeukaryotes, enhances our understanding of terrestrial biogeochemical cycling and … The program provides high-quality, large-scale genomic data to advance microbial research that drives sustainable … The program aims to generate high-quality genomic datasets, particularly for uncultivated microorganisms, by …

… program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … of genome scientists and recruit new talent for biosciences.  Adopt-a-Genome has: ~20 faculty from institutions …

… One of the JGI’s key assets is our user community, comprising a broad range of researchers … have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire …

… The JGI’s Science Programs offer support to users and their research … for and with users, and create computational tools and resources for them. Their concerted efforts help maximize the JGI’s impact in advancing both user science and the DOE science mission. Prospective users are …

… Berkeley, California.  Our location at the IGB fosters team science and collaboration with partner organizations such as the DOE Systems Biology Knowledgebase and the National Microbiome Data Collective.    … other relevant organisms. We provide access to large-scale datasets and analysis tools for genomes, metagenomes, and …

… of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties encoded within those genomes. Our aim is to more fully capture microbial and viral diversity, leading to a better understanding of microbial communities and ecosystem …