Agenda
Monday | Tuesday | Wednesday | Thursday | Friday
Monday, April 24, 2006 - Genome Structure
| 8:30 | Shuttle bus departs from Embassy Suites to JGI |
|---|---|
| 8:45 | Sign-in and continental breakfast at JGI |
| 9:00-9:30 | Set-up, Introductions, Overview, and Goals Paul Richardson, Richard Harland, Rob Grainger |
| 9:30-10:00 | Sequencing and Assembly Nik Putnam (PDF) |
| 10:00-10:45 | EST and cDNA Sequencing Erika Lindquist, Peter Brokstein, Mike Gilchrist (Intro, remainder) |
| 10:45-11:15 | cDNA and Genome Annotations at Sanger Laurens Wilming PPT, PDF |
| 11:15-11:30 | Coffee break |
| 11:30-12:30 | Gene Modeling, Content, and Browser Astrid Terry, Asaf Salamov, Igor Grigoriev |
| 12:30-1:30 | Lunch |
| 1:30-2:30 | Phylogeny and Metazome Overview Bill Dirks, David Goodstein, Dan Rokhsar |
| 2:30-2:45 | BAC Sequencing Jan-Fang Cheng |
| 2:45-3:15 | Laevis/Tropicalis Comparisons Uffe Hellsten |
| 3:15-3:30 | Coffee break |
| 3:30-5:00 | Browsing and discussions |
| 5:15 | Shuttle bus departs from JGI to Embassy Suites |
Tuesday, April 25, 2006 - Transcription Factors and Signaling
| 8:30 | Shuttle bus departs from Embassy Suites to JGI |
|---|---|
| 8:45 | Sign-in and continental breakfast at JGI |
| 9:00-9:30 | Conserved Non-Coding Regions Ivan Ovcharenko, Len Pennacchio |
| 9:30-10:00 | Transcription Factor Families and Conserved Non-Coding Regions Hajime Ogino |
| 10:00-10:30 | Expression Analysis Nicholas Pollet |
| 10:30-12:00 | Coffee break, browsing, and JGI Tours |
| 12:00-1:00 | Lunch |
| 1:00-1:30 | Early Patterning Richard Harland, Lyle Zimmerman |
| 1:30-2:00 | FGF Enrique Amaya |
| 2:00-2:30 | Wnt |
| 2:30-3:00 | Coffee break |
| 3:00-3:30 | BMP and Homeoboxes Ken Cho, Ira Blitz |
| 3:30-4:00 | BMP Lyle Zimmerman, Masanori Taira, Mustafa Khokha |
| 4:00-4:30 | Hox and Sox Tim Grammer,Ira Blitz |
| 4:30-5:00 | Discussions |
| 5:15 | Shuttle bus departs from JGI to Embassy Suites |
Wednesday, April 26, 2006 - Systems
| 8:30 | Shuttle bus departs from Embassy Suites to JGI |
|---|---|
| 8:45 | Sign-in and continental breakfast at JGI |
| 9:00-9:30 | Neural Crest Anne-Helene Monsoro-Burq (via Phone) |
| 9:30-10:00 | Endoderm
Aaron Zorn (via Phone) |
| 10:00-10:30 | Metamorphosis
Yun-Bo Shi |
| 10:30-11:00 | Coffee break |
| 11:00-11:30 | Hematopoesis Paul Mead |
| 11:30-12:00 | Heart Frank Conlon, Chris Showell, Paul Krieg |
| 12:00-1:00 | Lunch |
| 1:00-1:30 | Immune System Jacques Robert, Yuko Ota |
| 1:30-2:00 | Nervous System Takuya Nakayama |
| 2:00-2:30 | Eye Rob Grainger |
| 2:30-3:00 | Coffee break |
| 3:00-5:00 | Browsing and paper discussion |
| 5:15 | Shuttle bus departs from JGI to Embassy Suites |
| 6:00 | Shuttle Bus departs Embassy Suites to Restaurant Shuttle Bus will return to Embassy Suites after dinner |
| 6:15 | Jamboree Dinner Scott’s Seafood Grill and Bar 1333 N. California Blvd., Walnut Creek (corner of Calif. & Bonanza Streets) (925) 934-1300 |
Driving Instructions to Restaurant from JGI (if not using Jamboree Shuttle Bus)
Make right on Mitchell out of JGI parking lot, left on N. Wiget at stop sign, right on Ygnacio for 2.7 miles, left on N. California for .5 mile, right on Bonanza into parking garage.
Parking at Restaurant
The restaurant has a valet parking garage on Bonanza Street; metered parking is also available on both California and Bonanza Streets – free after 6:00 pm.
Thursday, April 27, 2006
| 8:30 | Shuttle bus departs from Embassy Suites to JGI |
|---|---|
| 8:45 | Sign-in and continental breakfast at JGI |
| 9:00-10:00 | Browsing and annotation |
| 10:00-10:30 | Limb Development Richard Harland |
| 10:30-11:00 | Sex Determination Tyrone Hayes |
| 11:00-11:30 | Coffee break |
| 11:30-12:00 | Reproductive System |
| 12:00-1:30 | Lunch and discussions |
| 1:30-2:00 | Transposable Elements Vladimir Kapitonov |
| 2:00-2:30 | Genome Organization, Finishing Challenges Jeremy Schmutz |
| 2:30-3:00 | Micro RNAs Mike Gilchrist |
| 3:00-5:00 | Browsing and paper discussion |
| 5:15 | Shuttle bus departs from JGI to Embassy Suites |
Friday, April 28, 2006
| 8:30 | Shuttle bus departs from Embassy Suites to JGI |
|---|---|
| 8:45 | Sign-in and continental breakfast at JGI |
| 9:00-9:30 | Paper Outline Paul Richardson |
| 9:30-10:00 | Gene Content Summary Astrid Terry |
| 10:00-11:00 | Phylogeny Summary Dan Rokhsar |
| 11:00-11:30 | Coffee break |
| 11:30-12:00 | Development Summary Richard Harland |
| 12:00-12:30 | Systems Summary Rob Grainger |
| 12:30-1:30 | Lunch |
| 1:30-3:00 | Manuscript preparation and discussions (optional) |
| 3:00 | Conclude |
| 3:00 | Shuttle bus departs from JGI to Embassy Suites |