Agenda

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Tuesday, September 20, 2005

8:45-9:30 Sign-in and Continental Breakfast
9:30-9:45 Introductions (Igor Grigoriev, JGI)
9:45-10:15 Introduction to Ostreococcus (Brian Palenik, UCSD) (slides)
10:15-10:45 Tauri story (Hervé Moreau, Banyuls) (slides)
10:45-11:00 Coffe break
11:00-11:20 Assembly of CCE9901(Nik Putnam, JGI) (slides)
11:20-11:40 Assembly of O.tauri (Evelyne Derelle, Banyuls) (slides)
11:40-12:00 Gene modeling and annotation (Igor Grigoriev, JGI) (slides)
12:00-1:00 Lunch
1:00-1:30 Comparative analysis of phytoplankton (Asaf Salamov, JGI) (slides)
1:30-2:00 Comparison w/enviromental samples (Gwenael Piganeau, Banyuls/Sheila Podell, UCSD) (GP's slides, SP's slides)
2:00-2:20 Transporters (Ian Paulsen, TIGR) (slides)
2:20-2:40 Noncoding genome conservation (Inna Dubchak, JGI) (slides)
2:40-3:00 Horizontal gene transfer (Sheila Podell/Terry Gaasterland, UCSD) (SP's slides, TG's slides)
3:00-3:15 Coffee break
3:30 Depart for JGI tour

Wednesday, September 21, 2005

8:45-9:30 Continental Breakfast
9:30-9:50 Finishing of CCE9901(Jane Grimwood, Stanford/JGI) (slides)
9:50-10:30 Special chromosomes 2 and 18 (Pierre Rouze/Stephane Rombauts, UGhent) (slides)
10:30-10:45 Coffee Break
10:45-11:05 Polyketide synthetases (Uwe John, Germany) (slides)
11:25-11:45 Signal transduction (Chris Bowler, Ecole Normale Superieure) (clock components, clock components summary, domains, KEGG profiles, protein domains, transcription factors, transcription factors summary)
11:45-12:05 DNA repair/remodeling and anaeroboic metabolism (Laurens Mets, University of Chicago) (slides)
12:05-1:00 Lunch
1:00-1:20 Metal/Sulfur Metabolism (Chris Dupont, UCSD) (slides)
1:20-1:40 Starch metabolism (Hervé Moreau)
1:40-2:00 Dynein (Greg Pazour, University of Massachusetts Medical
School) (slides)
2:00-2:20 Nitrogen Metabolism (Pierre Rouze, UGhent/Brian Palenik, UCSD) (slides)
2:20-3:00 Working groups/Open discussions
3:00-3:15 Coffee break
3:15-4:30 Working Groups/Open discussions
4:30 Depart for Dinner

Thursday, September 22, 2005

8:45-9:00 Continental Breakfast
9:00-9:30 Cell cycle (Steven Robbens, UGhent/Hervé Moreau, Banyuls) (slides)
9:30-9:50 Cyclophilins and FtSH Proteases (Olivier Vallon,  Institut de Biologie Physico-Chimique) (slides)
9:50-10:10 Chloroplasts and Mitochondria (Steven Robbens, UGhent) (slides)
10:10-10:30 Carotenoid/chlorophyll biosynthesis (Martin Lohr, Institut für Allgemeine Botanik, Mainz, Germany) (slides)
10:30-10:45 Coffee Break
10:45-11:05 Cytoskeleton/starch metabolism(Hervé Moreau, Banyuls) (slides)
11:05-11:25 Photosynthesis (Vera Tai, UCSD) (slides)
11:25-11:45 Peroxisome/proteomics data (Brian Palenik, UCSD) (slides)
12:00-1:00 Lunch
1:00-2:00 Jamboree Summary (Brian Palenik, UCSD) (slides)
2:00-4:00 Working groups/Open discussions