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Data Ecosystem
To expand access to integrated data, improve tools and infrastructure as well as ensure cohesive data standards, the JGI partners with a number of …
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Data Policy
Data produced and released by the US Department of Energy … Joint Genome Institute (JGI) are subject to the following Data Policy. It is our mission to support open data and information sharing. We also recognize the need to …
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Metabolomics Program
… molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, … advanced mass spectrometry techniques and computational tools, the program supports foundational research related to … program integrates cutting-edge metabolomics with genomic data to gain insights into how small molecules function …
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Synthesis
… group and focused on new technologies and optimizing tools — including strain engineering — to make them more … Synthetic Biology Informatics Group : a team that develops data science tools for workflow management and novel … users to validate hypotheses generated from mining genomic data by designing and assembling physical DNA constructs …
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Data Policy & Support
… … Read more about our data management practices and the resources we provide. … Read our research integrity and data code of conduct. … Data Management at the JGI … JGI Scientist Code of Conduct … …
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Microbiome Data Science Team
… technologies.  The exponential growth of DNA sequencing data, coupled with recent computational technology advances … in management, processing and visualization of “big data,” and artificial Intelligent/machine learning approaches in data analysis and interpretation is creating new …
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Metagenome Program
Program combines large-scale, time-series metagenomic data with detailed characterization of model systems to … evolution. The Program focuses on developing computational tools and visualization resources that support user analysis … and metatranscriptomics, to metagenomics and metabolomics data, shedding light on microbial metabolism and activity in …
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Secondary Metabolites Program
… support users, our efforts include developing computational tools for predicting biosynthetic gene clusters (BGCs), … cell- and cell free-based expression platforms, tools and data for deciphering regulatory networks, and refining … … The SMC provides complete sequence and annotation data for secondary metabolite biosynthetic gene clusters …
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DNA Synthesis Program
The DNA Synthesis Program aims to generate large datasets to explore sequence-function relationships, … innovative screening technologies and computational tools that enhance biofuel production and biosystem design. … has a research & development group, a team that develops data science tools, and a user science group. … The JGI has …
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Fungal & Algal Program
… fungal and algal pangenomes, and integrate multi-omics tools to enhance functional studies. These efforts seek to … sampling of fungi, laboratory analysis and genomics data exploration. … The Mycocosm web portal provides data access, visualization, and analysis tools for …
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Publication Policy
The JGI has a strong interest in seeing that the data produced by the facility result in scientific … below) for the generation of sequence or metabolomic data, DNA synthesized, and any other contributions, such as … and JGI together aim to publish the first analysis of data produced at the facility, provided this is done in a …
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