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… The JGI’s Microbial Program focuses on using cutting-edge sequencing, … provides high-quality, large-scale genomic data to advance microbial research that drives sustainable solutions in … The Microbial Program focuses on using advanced sequencing … driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal …

… through end-to-end automation — and further advancing sequence applications, single cell genomics, DNA synthesis, … [QA/QC]), large-scale liquid handling automation, and sequence analysis. … profiling transcription factor binding sites across entire genomes. This technology has been further scaled to a …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … within those genomes. Our aim is to more fully capture microbial and viral diversity, leading to a better …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will … in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Joint Genome … up-to-speed with some of the latest developments in microbial genomics, metagenomics, and computational biology, …

… and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, … discovering and characterizing giant viruses, which possess genomes and particle sizes that rival those of cellular … Cataloging Earth's microbial lineages through advanced genomic techniques and …

… The Metagenome Program uses advanced sequencing technologies to … genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses several experimental approaches to assess microbial activity across ecosystems.  By studying microbial …

… sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) … physical separation of a biologically relevant unit from a microbial community, such as a microcolony, microbial …

… When submitting sequences to the JGI DNA Synthesis program, please include … Sequence files for all constructs should be emailed to  … several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank files. ApE is an …

…   The Joint Genome Institute's DNA Synthesis Platform capabilities support researchers exploring how to convert sequence into functional assessments. This is done by … BOOST provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination …

… UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … more than 50,000 genomes that we derived from meta-genome sequences. As always, you’ll find transcripts and show notes … of the IMG data portal , which is a larger portal for microbial genomics. IMG stands for Integrated Microbial …

… Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your organisms? … pipelines.  You will receive automated emails as raw sequence data becomes available, and as analysis is …

… NOTICE The Data Portal application has replaced the JGI Genome Portal . Book a session via the appointment calendar … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to … for comprehensive access to information regarding genome and metagenome sequencing projects, and their …