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… went on to work at a groundbreaking company in the early 2000s called Ecopia, which was a very early genome mining … And I set that up. And we finally got that to work 10 years later. But in the meantime there, we had people … a teaspoon of soil from outside, you maybe have to do a 10,000-fold dilution to plate that out. The deeper you go in …

… recruit new talent for biosciences.  Adopt-a-Genome has: ~20 faculty from institutions across the country Efforts in … modules Currently 206 genomes have been selected with 11 published manuscripts published to-date Testimonials: … JGI-sequenced and publicly available datasets encompassing >150,000 isolate genomes, 230,000 metagenome-assembled …

… getting them out to you all. But for now, here is episode 10 of Natural Prodcast, the primer on genome mining. Hey, … found in Yu et al, APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2004, 1253–1262, 70:3 ALISON TAKEMURA: And so did you succeed … Microbiomes” paper is here . Read the associated JGI news release here . Software we discussed, used for genome …

… list available at Google Scholar. Dutkiewicz, Z. et al (2025) “ Proposal of Patescibacterium danicum gen. nov., sp. … phyl. nov .”  ISME Communications , Volume 5 Issue 1. Wittmers, F. et al (2024) “ Non-photosynthetic lineages … meta-omic conclusions .”  Nature Communications Volume 15 Article 9873. Buscaglia, M. et all (2024) “ Adaptation …

… DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot going on, so I … never forced it on me, but we always had these scientific news magazines lying around at home. And I would just pick … Metabolites Science Program . Since his arrival in 2017, Nigel has led a vision for the JGI that sees secondary …

… of secondary metabolism. Welcome back. This will be episode 12 of Natural Prodcast. And it’s our conversation with … Europe. So if there are any kind of dated references to the news, that’s why. But it was a really fun conversation. And …

… Right, because they’re so reactive. BEN: …going back to the 1950s. But the structure of which was not known until the … So I wanted to ask you also about – because you were in the news recently – TSRI has acquired the Pfizer strain … at several natural product enediyne structures, Ben’s 2015 paper on genome mining for enediynes is one of my …

… And you have these different types of particulate like 2.5, 10 PPMs and just the size of the particle and how far they … there a way to do that? DAN UDWARY: Well, so there’s good news and bad news on that. So one of the things that we’re … Metabolites Collaboratory SMC Workshop Materials from the 2023 JGI Annual Meeting Using the SMC Website API Endpoints …

… Myco-Ed has:  ~50 lineages selected for sequencing 16 genomes released 20 members from 15 institutions 300+ students 800+ iNaturalist observations …

… FY2025 Spending Profile The JGI is funded primarily by the DOE …

… that there was almost nothing. Now, this is back in the 1970s. So, I thought to myself, maybe I can use my … seems hard to believe in retrospect. BILL FENICAL: Well, in 2021, absolutely hard to believe. But when you go way back, … discovered this and it got developed in somewhere around 2004, I guess, something like that, and now, 2021, it doesn’t …