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Natural Prodcast Episode 11: Marnix Medema
… welcome back to Natural Prodcast, and this will be episode 11. This continues our little sprint on genome mining. In … talk and that now I can bring it to you. So enjoy, episode 11 of Natural Prodcast. Alison Takemura: Marnix, where are …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… there a way to do that? DAN UDWARY: Well, so there’s good news and bad news on that. So one of the things that we’re … happening. And so we should have somewhere around 10, 11, 12 million BGCs in the database on the release, and …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… getting them out to you all. But for now, here is episode 10 of Natural Prodcast, the primer on genome mining. Hey, … this is Challis et al, Chemistry and Biology, 2000, 211-224, 7:3 And so, you can then make predictions about … Nature  Biotechnology . 2020 Nov 9. doi: 10.1038/s41587-020-0718-6) DAN UDWARY: Yeah, I think that might be a good …
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Environmental Genomics Group
… into DNA by active microbial populations (Hungate et al. 2015). With the development of high-throughput SIP (Nuccio et … strategies across environmental microbiomes. mSystems0:e01744-24. https://doi.org/10.1128/msystems.01744-24 Oliver, T., Varghese, N., Roux, S. et …
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New Lineages of Life Group
… phyl. nov .”  ISME Communications , Volume 5 Issue 1. Wittmers, F. et al (2024) “ Non-photosynthetic lineages … meta-omic conclusions .”  Nature Communications Volume 15 Article 9873. Buscaglia, M. et all (2024) “ Adaptation … marine ecosystems .”  The ISME Journal , Volume 18 Issue 1. Pitot, T.M., et al (2024) “ Conservative …
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CSP New Investigator Call
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Viral Genomics Group
… from metagenomes. mSystems 9:e00888-24. https://doi.org/10.1128/msystems.00888-24 Coclet, C., Sorensen, P.O., … of hypermutation in the global microbiome. Nat Commun 12, 3076. https://doi.org/10.1038/s41467-021-23402-7 Roux, S. and …
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Partnerships: Adopt-A-Genome
… modules Currently 206 genomes have been selected with 11 published manuscripts published to-date Testimonials: … JGI-sequenced and publicly available datasets encompassing >150,000 isolate genomes, 230,000 metagenome-assembled … Resour Announc 0:e00891-25. https://doi.org/10.1128/mra.00891-25 . B. Christenson, I. Nouioui, C. Daum, M. …
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Natural Prodcast Episode 7: Ben Shen
… Right, because they’re so reactive. BEN: …going back to the 1950s. But the structure of which was not known until the … So I wanted to ask you also about – because you were in the news recently – TSRI has acquired the Pfizer strain … at several natural product enediyne structures, Ben’s 2015 paper on genome mining for enediynes is one of my …
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Natural Prodcast Episode 14: Nigel Mouncey
… DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot going on, so I … never forced it on me, but we always had these scientific news magazines lying around at home. And I would just pick … Metabolites Science Program . Since his arrival in 2017, Nigel has led a vision for the JGI that sees secondary …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… and materials. The proposal submission deadline is March 31, 2026 .  … the Molecular Foundry, the project needs to be scoped for 12 months or less. We can help you scope that part of the proposal. Also, once awarded, users have 12 months before they need to activate their project. …
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Natural Prodcast Episode 17: Cassandra Quave
… then my lab pleaded mercy, and I said, OK, we’ll just do 2011 to present day. And it was still like 4,000 articles we … plants and bringing them back is not your jam, the good news is there’s this amazing resource that can be provided …
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